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PI0005858 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005858
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:10286607..10287581
RNA-Seq ExpressionPI0005858
SyntenyPI0005858
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-2978.31Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHGK+
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.9e-2875.9Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGA + HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-2978.31Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHGK+
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]3.3e-2874.7Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]3.3e-2874.7Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-2874.7Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-2978.31Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHGK+
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.3e-2975.9Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGA + HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-2978.31Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQEP++LEEV+QHGK+
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-2874.7Show/hide
Query:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK
        N+ +LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ CN+NE+YMENIHYMYDVPIVPAPVQRRR  VQE ++LEEV+QHG++
Subjt:  NLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCAATTACACGGACAAGCTTATGGTTCGAGGTACATGTTTGATCTTCTTCAACCTGATCAGGCTCTATATCACTCGACCGGGAGCTGCTGTAGGTCATCTGAG
GTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATAGATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTAC
CTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTAATGAATTGGAAGAAGTTGAACAACATGGCAAGAAGTGCCTCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCATCAATTACACGGACAAGCTTATGGTTCGAGGTACATGTTTGATCTTCTTCAACCTGATCAGGCTCTATATCACTCGACCGGGAGCTGCTGTAGGTCATCTGAG
GTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATAGATGCAACAATAACGAGCGGTACATGGAGAACATACACTATATGTACGATGTAC
CTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTAATGAATTGGAAGAAGTTGAACAACATGGCAAGAAGTGCCTCTTGTGA
Protein sequenceShow/hide protein sequence
MIINYTDKLMVRGTCLIFFNLIRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDRCNNNERYMENIHYMYDVPIVPAPVQRRRARVQEPNELEEVEQHGKKCLL