CuGenDBv2

Gene ID	PI0005863
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Beta-galactosidase
Genome location	chr06:21295112..21295781
RNA-Seq Expression	PI0005863
Synteny	PI0005863
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0006974 - cellular response to DNA damage stimulus (biological process) GO:0000166 - nucleotide binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003824 - catalytic activity (molecular function)
InterPro domains	IPR029472 - Retrotransposon Copia-like, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0034386.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.3e-25

61.68

Show/hide

Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

TYJ97256.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.3e-25

61.68

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Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.3e-25

61.68

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Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.3e-25

61.68

Show/hide

Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

TYK16957.1 ATP-dependent DNA helicase 2 subunit KU70 [Cucumis melo var. makuwa]

1.3e-25

61.68

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Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SM64 Beta-galactosidase

6.1e-26

61.68

Show/hide

Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

A0A5A7UGB2 Beta-galactosidase

6.1e-26

61.68

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Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

A0A5D3BDV4 Beta-galactosidase

6.1e-26

61.68

Show/hide

Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

A0A5D3BJK7 Beta-galactosidase

6.1e-26

61.68

Show/hide

Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

A0A5D3C4T4 Beta-galactosidase

6.1e-26

61.68

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Query:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP
        P F G G+DQ  NR   + GE+            SKNPVTSFP   SN+ITGS+  STGNF GEKLNGQN+FSWSQSIKMFLE R QFGFLT EI RPPP
Subjt:  PYFHGTGVDQNYNRLGFDVGETLAQ---------SKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPP

Query:  DDDQECL
         D  E L
Subjt:  DDDQECL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGAAACCAGAGCTGACCACGAGTCCACCGTCGCGCAGCCGAGATGAACGCCGCAGTCGCTGCCGCCGCCATGGAAAAAGTAATCCATCAGCTTTAGAAGGCGCTGACGG
TCATGTCTATCTCACCCTCGGAGTCTTCCATGCAGCACAGCGTCGCAGATCTGCCTCATGCGTCGTTGTCGGGCGCGTGGGTCCACGCGCCGCCGTCAGTTCATCTCACC
GTCCAGACCAATGCATTCCCTGTGTTGTCGTCTGTCCAACCGTCTTACCCTTCTGTCCATCCCCTTACTTCCATGGTACCGGAGTTGACCAAAATTACAACAGACTTGGG
TTTGATGTCGGCGAGACCTTAGCGCAATCCAAAAACCCGGTAACGTCGTTCCCTACTCGAACATCAAATTTTATTACTGGTTCTATGGTTCCCTCCACAGGTAACTTTCC
AGGAGAAAAGCTGAATGGGCAGAATTTTTTCTCTTGGTCCCAATCGATCAAGATGTTTCTTGAGAGACGCCAACAATTTGGGTTTCTGACTAGTGAGATTCCCCGTCCTC
CACCCGATGATGATCAAGAATGCCTCTAG

mRNA sequence

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Protein sequence

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MKPELTTSPPSRSRDERRSRCRRHGKSNPSALEGADGHVYLTLGVFHAAQRRRSASCVVVGRVGPRAAVSSSHRPDQCIPCVVVCPTVLPFCPSPYFHGTGVDQNYNRLG
FDVGETLAQSKNPVTSFPTRTSNFITGSMVPSTGNFPGEKLNGQNFFSWSQSIKMFLERRQQFGFLTSEIPRPPPDDDQECL

PI0005863 (gene) of Melon (PI 482460) v1 genome