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PI0005866 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005866
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:6339399..6339752
RNA-Seq ExpressionPI0005866
SyntenyPI0005866
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]8.1e-4468.38Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        M++S+RAP+H WT+EEE  LVECL+ELVS GGW+SDNGTFRPGYLAQL RMMAEKLP   ++ +  IDC +K+LK+T+QAIAEMRGP+CSG GWN+E +C
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVKVQFI
        I+AE +LFDNWV+V+ I
Subjt:  IIAEHDLFDNWVKVQFI

KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-4579.65Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        M SSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DC VKSLKK   +   MRGPSCSG GWNE++QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFDNWVK
Subjt:  IIAEHDLFDNWVK

KAA0066605.1 retrotransposon protein [Cucumis melo var. makuwa]3.4e-5094.23Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        MASSSRAPKHTWTKEEEAKLVECLVELVS+GGWRS+NGTFRPGYLAQLQRMMAEKLPDTNIQGSPTID  VKSLKKTYQAIAEMRGPSCSG GWNEE+QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAE
        IIAE
Subjt:  IIAE

TYK19779.1 retrotransposon protein [Cucumis melo var. makuwa]9.6e-4578.76Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        M SSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DC VKSLKK   +   +RGPSCSG GWNE++QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFDNWVK
Subjt:  IIAEHDLFDNWVK

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]6.2e-5287.61Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        MAS SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSG GWNEE+QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFD+W+K
Subjt:  IIAEHDLFDNWVK

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859533.0e-5287.61Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        MAS SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSG GWNEE+QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFD+W+K
Subjt:  IIAEHDLFDNWVK

A0A5A7TJS2 Retrotransposon protein1.2e-4579.65Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        M SSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DC VKSLKK   +   MRGPSCSG GWNE++QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFDNWVK
Subjt:  IIAEHDLFDNWVK

A0A5A7U0H7 Retrotransposon protein3.0e-5287.61Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        MAS SRAPKHTWTKEEE K VECLVELVSSGGWRSDNGTF+PGYLAQLQRMMAEKLP TNIQ S TIDC VKSLKKTY AIAEMRGPSCSG GWNEE+QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFD+W+K
Subjt:  IIAEHDLFDNWVK

A0A5D3CQS4 Retrotransposon protein1.6e-5094.23Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        MASSSRAPKHTWTKEEEAKLVECLVELVS+GGWRS+NGTFRPGYLAQLQRMMAEKLPDTNIQGSPTID  VKSLKKTYQAIAEMRGPSCSG GWNEE+QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAE
        IIAE
Subjt:  IIAE

A0A5D3D8J6 Retrotransposon protein4.6e-4578.76Show/hide
Query:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC
        M SSSRA KHTWTKEEEAKLVECLVELVS+GGWRS+NGTFR GYLAQLQRMM +KL DTNIQGS  +DC VKSLKK   +   +RGPSCSG GWNE++QC
Subjt:  MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQC

Query:  IIAEHDLFDNWVK
        IIAE DLFDNWVK
Subjt:  IIAEHDLFDNWVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAA
TGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTTGTGTGAAATCCC
TCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGTAGTGGGTTAGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACACGACTTGTTTGATAAT
TGGGTCAAGGTACAGTTTATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCTTCACGAGCACCCAAACACACATGGACTAAAGAGGAAGAAGCGAAGTTGGTTGAGTGTTTGGTGGAATTGGTTTCATCTGGCGGGTGGAGGTCAGATAA
TGGGACATTTCGACCTGGATATTTAGCACAGTTGCAACGGATGATGGCGGAGAAGTTGCCCGACACTAACATCCAAGGATCACCGACTATTGATTGTTGTGTGAAATCCC
TCAAGAAAACTTATCAGGCAATTGCAGAAATGAGGGGGCCATCCTGTAGTGGGTTAGGGTGGAATGAAGAATATCAGTGCATCATCGCGGAACACGACTTGTTTGATAAT
TGGGTCAAGGTACAGTTTATTTAA
Protein sequenceShow/hide protein sequence
MASSSRAPKHTWTKEEEAKLVECLVELVSSGGWRSDNGTFRPGYLAQLQRMMAEKLPDTNIQGSPTIDCCVKSLKKTYQAIAEMRGPSCSGLGWNEEYQCIIAEHDLFDN
WVKVQFI