CuGenDBv2

Gene ID	PI0005889
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	30S ribosomal protein S1
Genome location	chr06:5606420..5610416
RNA-Seq Expression	PI0005889
Synteny	PI0005889
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR003029 - S1 domain IPR012340 - Nucleic acid-binding, OB-fold IPR022967 - RNA-binding domain, S1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052175.1 30S ribosomal protein S1 [Cucumis melo var. makuwa]

1.3e-213

91.32

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA          TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCL---------------------FSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL
        K +                     F VKGTVFCTDNNGALVDITAKSSAYLP+QEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL
Subjt:  KCL---------------------FSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL

Query:  AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
        AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Subjt:  AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK

Query:  PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML
        PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML
Subjt:  PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML

Query:  RFQPESGLTLTTDGILGPITPDLPEEGLDLNDVPLAEE
        RFQPESGLTLTTDGILGPITP+LP EGLDLNDVP AEE
Subjt:  RFQPESGLTLTTDGILGPITPDLPEEGLDLNDVPLAEE

XP_004147619.1 30S ribosomal protein S1, chloroplastic [Cucumis sativus]

9.2e-212

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRC PLSSSRLSKPFSSKH LNKSRSLPVQAA          T+ERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTDNNGALVDITAKSSAYLP+QEACIHRIKHVEEAG+FPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQISTKS AEELL+KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

XP_008438974.1 PREDICTED: 30S ribosomal protein S1, chloroplastic [Cucumis melo]

8.9e-215

95.68

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA          TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTDNNGALVDITAKSSAYLP+QEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

XP_022138241.1 30S ribosomal protein S1, chloroplastic [Momordica charantia]

8.1e-208

92.09

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRC PLSSSRLS PFS +HL NK+RSLPV AA          TKERFKLKEVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTD NGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDL+DVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

XP_038878013.1 30S ribosomal protein S1, chloroplastic-like [Benincasa hispida]

2.7e-211

93.76

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRCVPLSSSRLSKPFSS+HL +K+RSLPVQAA          TKERFKLKEVFEEAYERCRNAPVEGI+FTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENE+DDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDI TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AXL6 30S ribosomal protein S1, chloroplastic

4.3e-215

95.68

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA          TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTDNNGALVDITAKSSAYLP+QEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

A0A5A7UEP7 30S ribosomal protein S1

6.2e-214

91.32

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA          TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCL---------------------FSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL
        K +                     F VKGTVFCTDNNGALVDITAKSSAYLP+QEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL
Subjt:  KCL---------------------FSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDL

Query:  AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
        AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK
Subjt:  AWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLK

Query:  PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML
        PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML
Subjt:  PYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADML

Query:  RFQPESGLTLTTDGILGPITPDLPEEGLDLNDVPLAEE
        RFQPESGLTLTTDGILGPITP+LP EGLDLNDVP AEE
Subjt:  RFQPESGLTLTTDGILGPITPDLPEEGLDLNDVPLAEE

A0A6J1C966 30S ribosomal protein S1, chloroplastic

3.9e-208

92.09

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQFTGLRC PLSSSRLS PFS +HL NK+RSLPV AA          TKERFKLKEVFE+AYERCRNAPVEGISFTLEDFHAALEKYDFDSE+GT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTD NGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPG+REEFVIIGENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQIS+KSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTLTTDGILGPITP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDL+DVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

A0A6J1F6H4 30S ribosomal protein S1, chloroplastic-like

1.3e-203

89.21

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQF GLRC PLSSSRLSKPFSS+HL N++RSLPVQAA           KERFKLKE+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTD NGALVDITAKSSAYLP+QEACIHRIKHVEEAGI+PGLR+EFVIIGENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQISTKSTAEELL KE+PLKFVEVDEEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIA AEA+ARADML+FQPESGLTLTTDGILGP+TP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

A0A6J1IAT2 30S ribosomal protein S1, chloroplastic

5.9e-204

89.21

Show/hide

Query:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MASMAQQF GLRC PLSSSRLSKPFSS+HL N++RSLPVQAA           KERFKLKE+FEEAYERCRNAPVEGISFT+EDFH+A+EKYDF+SE+GT
Subjt:  MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAA----------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        K    VKGTVFCTD+NGALVDITAKSSAYLP+QEACIHRIKHVEEAGI+PGLR+EFVIIGENE+DDSL+LSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGGVVAVVEGLRGFVPFSQISTKSTAEELL KE+PLKFVEVDEEQSRLVLSNRKA+ADSQAQLGIGSVV GTVQSLKPYGAFIDIGG+NGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIA AEA+ARADML+FQPESGLTLTTDGILGP+TP
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDLNDVPLAEE
        +LP EGLDLNDVP AEE
Subjt:  DLPEEGLDLNDVPLAEE

SwissProt top hits

e value

%identity

Alignment

O33698 30S ribosomal protein S1

4.5e-44

34.97

Show/hide

Query:  EDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE
        +DF  ALE    DS+ G      V+G V     +GA +DI  K+ A+LP +EA +H +  + EA +      EF++I +   D  + +SLR++  + AW 
Subjt:  EDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWE

Query:  RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QLGIGSVVTGTVQSLKPY
        R  +LQ     V+ KV  +NKGGV A +EGLR F+P S ++ K   + L  K L + F+EV+    +LVLS R+A   +   ++ +G ++ G V  LKP+
Subjt:  RCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QLGIGSVVTGTVQSLKPY

Query:  GAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI
        G F+D+GG   LL ++QIS   ++D+  + + GD ++ ++++ D  +GR+SLSTK LE  PG+++ N   +   A + A+  R+++
Subjt:  GAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI

P29344 30S ribosomal protein S1, chloroplastic

7.4e-188

82.89

Show/hide

Query:  MASMAQQFT-GLRCVPLSSSRLSKPFSSKHLLNKSRSLPV-------QAATKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKC
        MAS+AQQ   GLRC PLS+S LSKPFS KH L K R  P+        A T+ER KLK++FE+AYERCRNAP+EG+SFT++DFH AL+KYDF+SE+G++ 
Subjt:  MASMAQQFT-GLRCVPLSSSRLSKPFSSKHLLNKSRSLPV-------QAATKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKC

Query:  LFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDAN
           VKGTVFCTD NGALVDITAKSSAYLP+ EACI+RIK+VEEAGI PG+REEFVIIGENE+DDSLILSLR IQY+LAWERCRQLQAEDVVVKGK+V AN
Subjt:  LFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDAN

Query:  KGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD
        KGGVVA+VEGLRGFVPFSQIS+KS+AEELL KE+PLKFVEVDEEQSRLV+SNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD
Subjt:  KGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHD

Query:  RISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPDL
        R+SDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+T DL
Subjt:  RISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPDL

Query:  PEEGLDLNDVPLAEE
        P EGLDL+ VP A E
Subjt:  PEEGLDLNDVPLAEE

P46228 30S ribosomal protein S1

1.5e-79

51.15

Show/hide

Query:  RNAPVEGISFTLEDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLIL
        ++ P   I FT EDF A L++YD+    G     +V GTVF  +  GAL+DI AK++A+LPVQE  I+R++  EE  + P    EF I+ +   D  L L
Subjt:  RNAPVEGISFTLEDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLIL

Query:  SLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QLGIGS
        S+R I+Y  AWER RQLQ ED  V+ +V   N+GG +  +EGLRGF+P S IST+   E+L+ +ELPLKF+EVDE+++RLVLS+R+A+ + +  +L +G 
Subjt:  SLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQA-QLGIGS

Query:  VVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI-A
        VV G V+ +KPYGAFIDIGG++GLLH+S+ISHD I    +V    D +KVMI+  D ERGR+SLSTK+LEP PGDM+RNP++V+EKAEEMA  +R+++  
Subjt:  VVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRI-A

Query:  QAEAL
        QAE L
Subjt:  QAEAL

P73530 30S ribosomal protein S1 homolog A

4.5e-76

48.73

Show/hide

Query:  ISFTLEDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQY
        I FTLEDF A L+KYD+    G      V GTVF  ++ GAL+DI AK++AY+P+QE  I+R+   EE  + P    EF I+ +   D  L LS+R I+Y
Subjt:  ISFTLEDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQY

Query:  DLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQ
          AWER RQLQAED  V+  V   N+GG +  +EGLRGF+P S IS +   E+L+ ++LPLKF+EVDEE++RLVLS+R+A+ + +   L +  VV G+V+
Subjt:  DLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIGSVVTGTVQ

Query:  SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARA
         +KPYGAFIDIGG++GLLH+S+ISHD I    +V    D +KVMI+  D ERGR+SLSTK+LEP PG M+++  LV E A+EMA+ FRQ+      LA A
Subjt:  SLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARA

Query:  DMLRFQPESGLTLTTD
          + ++P + +  T D
Subjt:  DMLRFQPESGLTLTTD

Q93VC7 30S ribosomal protein S1, chloroplastic

1.1e-175

77.7

Show/hide

Query:  MASMAQQFTGLRCVPL-SSSRLSKPFSSKHLLNKSRSL--PVQAA-------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MAS+AQQF+GLRC PL SSSRLS+  S     NKS S+   + AA       TKER +LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT
Subjt:  MASMAQQFTGLRCVPL-SSSRLSKPFSSKHLLNKSRSL--PVQAA-------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        +    VKGTVF TD NGALVDI+AKSSAYL V++ACIHRIKHVEEAGI PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWERCRQLQAEDV+VK KV+ 
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVEVDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDR+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDL--NDVPLA
        +LP++G+DL  +D+P A
Subjt:  DLPEEGLDL--NDVPLA

Arabidopsis top hits

e value

%identity

Alignment

AT1G71720.1 Nucleic acid-binding proteins superfamily

1.7e-22

31.22

Show/hide

Query:  ILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVP----FSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ
        +LS R     +AW R RQ++  +  ++ K+ + N GG++  +EGLR F+P      +++T +  +E + +   ++   ++E+++ L+LS +  +A  +  
Subjt:  ILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVP----FSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ

Query:  LGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT
        L  G+++ GTV  + PYGA + +G    +GLLH+S I+  RI  ++ VLQ  +++KV+++       ++SLS   LE  PG  I + + VF +AEEMA+ 
Subjt:  LGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQT

Query:  FRQRI
        +R+++
Subjt:  FRQRI

AT3G11964.1 RNA binding;RNA binding

5.7e-10

28.76

Show/hide

Query:  QLGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ
        +L +G +++G ++ ++P+G FIDI   G+ GL H+SQ+S DR+ ++    + G++++  IL  D E+ R+SL  K      GD  +   L  +       
Subjt:  QLGIGSVVTGTVQSLKPYGAFIDIG--GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQ

Query:  TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPI--TPDLPEEGLDLNDV
               ++E LA  D   FQ  SG    T  +L  +     +P   +DL+D+
Subjt:  TFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPI--TPDLPEEGLDLNDV

AT3G23700.1 Nucleic acid-binding proteins superfamily

3.2e-21

32.22

Show/hide

Query:  WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEE-----------LLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIG
        W+  +         +G+V   N GG++     L GF+P+ Q+S   + +E           L+  +LP+K V+ DEE  +L+LS + A+    +Q + +G
Subjt:  WERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEE-----------LLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQ-LGIG

Query:  SVVTGTVQSLKPYGAFIDIG------GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP
         V  G V S++ YGAFI +        + GL+HVS++S D + D+  VL+ GD ++V++ + D+E+ R++LS K+LE  P
Subjt:  SVVTGTVQSLKPYGAFIDIG------GINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTP

AT5G14580.1 polyribonucleotide nucleotidyltransferase, putative

1.0e-11

36.94

Show/hide

Query:  VEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRV
        + +D     +V  N+  M  +Q Q        L +G V  GTV S+K YGAF++  GG  GLLH+S++SH+ +S ++ VL  G  +  M +  D  RG +
Subjt:  VEVDEEQSRLVLSNRKAMADSQAQ--------LGIGSVVTGTVQSLKPYGAFIDI-GGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRV

Query:  SLSTKKLEPTP
         LS K L P P
Subjt:  SLSTKKLEPTP

AT5G30510.1 ribosomal protein S1

7.9e-177

77.7

Show/hide

Query:  MASMAQQFTGLRCVPL-SSSRLSKPFSSKHLLNKSRSL--PVQAA-------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT
        MAS+AQQF+GLRC PL SSSRLS+  S     NKS S+   + AA       TKER +LK++FE+AYERCR +P+EG++FT++DF AA+E+YDF+SE+GT
Subjt:  MASMAQQFTGLRCVPL-SSSRLSKPFSSKHLLNKSRSL--PVQAA-------TKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGT

Query:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD
        +    VKGTVF TD NGALVDI+AKSSAYL V++ACIHRIKHVEEAGI PG+ EEFVIIGENESDDSL+LSLR+IQY+LAWERCRQLQAEDV+VK KV+ 
Subjt:  KCLFSVKGTVFCTDNNGALVDITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVD

Query:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS
        ANKGG+VA+VEGLRGFVPFSQIS+K+ AEELL KE+PLKFVEVDEEQ++LVLSNRKA+ADSQAQLGIGSVV G VQSLKPYGAFIDIGGINGLLHVSQIS
Subjt:  ANKGGVVAVVEGLRGFVPFSQISTKSTAEELLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQIS

Query:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP
        HDR+SDIATVLQPGDTLKVMILSHDR+RGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTL++DGILGP+  
Subjt:  HDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITP

Query:  DLPEEGLDL--NDVPLA
        +LP++G+DL  +D+P A
Subjt:  DLPEEGLDL--NDVPLA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCATGGCTCAGCAATTTACTGGGTTGCGATGTGTTCCTCTTTCTTCATCGCGTCTCTCCAAGCCATTTTCTTCTAAGCATTTGCTGAACAAGTCCCGTTCGCT
TCCCGTTCAAGCTGCAACCAAGGAGCGTTTCAAGCTCAAGGAGGTCTTTGAGGAGGCTTATGAACGTTGCCGTAATGCCCCTGTAGAAGGCATATCTTTCACTCTCGAGG
ACTTCCATGCCGCTCTTGAAAAATACGACTTCGATTCTGAATTGGGAACTAAGTGTCTCTTTTCAGTGAAAGGTACTGTGTTTTGTACGGATAATAATGGAGCACTTGTT
GACATTACTGCCAAGTCATCTGCATATTTGCCAGTGCAAGAGGCTTGCATTCACAGAATAAAACATGTAGAAGAAGCAGGAATATTTCCTGGCTTGAGAGAGGAGTTTGT
TATTATTGGTGAGAATGAATCTGATGATAGCTTGATTTTGAGCTTGAGATCCATTCAATATGACCTGGCTTGGGAGAGGTGCAGACAGCTTCAAGCAGAGGACGTTGTTG
TCAAGGGTAAGGTGGTTGATGCTAACAAAGGTGGAGTTGTGGCAGTTGTGGAAGGCCTAAGAGGGTTTGTCCCTTTCTCACAGATATCAACGAAATCAACTGCTGAAGAG
CTTCTCAACAAGGAGCTTCCTCTAAAGTTTGTGGAGGTTGATGAAGAACAATCAAGGCTTGTCCTTAGTAACCGTAAGGCCATGGCTGACAGCCAGGCACAACTTGGAAT
TGGATCAGTGGTCACTGGGACGGTTCAAAGCCTTAAACCTTATGGTGCATTCATTGATATTGGTGGAATCAATGGTCTTCTTCATGTTAGTCAAATCAGTCATGATCGGA
TATCGGATATTGCAACAGTTCTTCAGCCTGGAGACACTCTCAAGGTCATGATATTGAGCCACGATCGTGAGAGAGGCCGAGTTAGTCTTTCTACCAAGAAGTTAGAGCCC
ACTCCTGGGGACATGATTCGCAATCCAAAGCTTGTTTTTGAGAAGGCTGAGGAGATGGCACAAACGTTCAGGCAAAGAATAGCCCAGGCAGAGGCATTGGCACGTGCAGA
CATGCTTAGGTTTCAGCCTGAGAGTGGTTTGACTTTGACTACTGATGGAATCTTGGGACCAATTACTCCAGATTTACCTGAAGAGGGTTTAGATTTGAATGATGTACCTC
TAGCTGAAGAGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASMAQQFTGLRCVPLSSSRLSKPFSSKHLLNKSRSLPVQAATKERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKCLFSVKGTVFCTDNNGALV
DITAKSSAYLPVQEACIHRIKHVEEAGIFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSTAEE
LLNKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGINGLLHVSQISHDRISDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEP
TPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPDLPEEGLDLNDVPLAEE

PI0005889 (gene) of Melon (PI 482460) v1 genome