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PI0005918 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005918
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetroelement pol polyprotein-like
Genome locationchr01:18777354..18777755
RNA-Seq ExpressionPI0005918
SyntenyPI0005918
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]6.4e-2962.4Show/hide
Query:  NLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPN
        N ++   Q NDALLQ QASSI+NLE+QLGQL S+ S R +GSLPSN ETPNQ GGSGKEKC  VTLRS RNLTIR+P  ER   TS ST +I S+S   N
Subjt:  NLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPN

Query:  LINFSLTDNVSSSQNNDVPSKGFES
         +N SLT+N SS QN ++P+K  ES
Subjt:  LINFSLTDNVSSSQNNDVPSKGFES

KGN51008.1 hypothetical protein Csa_008461 [Cucumis sativus]6.2e-1662.65Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAER
        ME L REYMQ+NDALLQ QASSI+NLE+QLGQLA+D S R +G+L  N +TP Q GGS  +K   VTLRS RNLTI + ++E+
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAER

WP_217833224.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]6.7e-1866.25Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPD
        ME LL+EYMQKNDAL+Q QASSIRNL++QLGQ+A +F  RQ+GSLPSN E P   G SGKE+C AVTLRSG+ L     D
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPD

XP_038891676.1 uncharacterized protein LOC120081070 [Benincasa hispida]1.5e-1455.17Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPT
        +ENLL+EY+ +NDALL+ QASSIRNLE+Q+ Q+AS+   RQ G LPSN ETP     +GKEKCH VTL++G+ L  R  +   S P+
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPT

XP_038896707.1 uncharacterized protein LOC120084967 [Benincasa hispida]1.2e-1449.07Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNS-TAEIDSSSR
        +ENLL+EY+ +NDALL+ QASSIRNLE+Q+GQ+A++   RQ   LPSN ETP     +GKE+CH VTLRSG+ L  R  ++  S P     T  +D   R
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNS-TAEIDSSSR

Query:  IPNLINFS
        +P   + S
Subjt:  IPNLINFS

TrEMBL top hitse value%identityAlignment
A0A0A0KMN3 Uncharacterized protein4.4e-1566.18Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTL
        ME+L +EYMQ+NDALLQ QA+SI+NLE+Q+GQ+A+D S + +G+LPSN E P Q G SGKEKC AVTL
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTL

A0A0A0KN83 Uncharacterized protein3.0e-1662.65Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAER
        ME L REYMQ+NDALLQ QASSI+NLE+QLGQLA+D S R +G+L  N +TP Q GGS  +K   VTLRS RNLTI + ++E+
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAER

A0A5A7TGS2 Uncharacterized protein3.1e-2962.4Show/hide
Query:  NLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPN
        N ++   Q NDALLQ QASSI+NLE+QLGQL S+ S R +GSLPSN ETPNQ GGSGKEKC  VTLRS RNLTIR+P  ER   TS ST +I S+S   N
Subjt:  NLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPN

Query:  LINFSLTDNVSSSQNNDVPSKGFES
         +N SLT+N SS QN ++P+K  ES
Subjt:  LINFSLTDNVSSSQNNDVPSKGFES

A0A5A7UDZ7 Uncharacterized protein1.7e-1153.16Show/hide
Query:  PNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPNLINFSLTDNVSSSQNNDVPSKGFESKGQ
        PNQAGGS KEK   +TL+SGRNLTIR+P++    PTS ST ++D+SS+    +NFSLT++ SS Q N++P+K  +S  Q
Subjt:  PNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPNLINFSLTDNVSSSQNNDVPSKGFESKGQ

A0A5D3C0P6 Uncharacterized protein2.4e-1346.36Show/hide
Query:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKC-HAVTLRSGRNLTIRDPDAERSY---PTSNSTAEIDS
        ME LL +YMQ+ND LLQ QA+ ++NLE+QLGQLA DF GR +G  PSN ETPNQ GG GKEKC +   L      T RD   ++ +    +SN  + +  
Subjt:  MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKC-HAVTLRSGRNLTIRDPDAERSY---PTSNSTAEIDS

Query:  SSRIPNLINF
          ++P+ + F
Subjt:  SSRIPNLINF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGGCAGGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTAGCTAGTGATTT
CTCCGGAAGACAACAAGGATCCCTCCCAAGTAATGCAGAAACGCCAAATCAGGCAGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTTCGCAGTGGAAGGAATT
TAACCATCCGCGATCCTGACGCTGAACGTAGTTACCCCACTTCTAACTCTACTGCCGAGATTGACAGTTCAAGTAGAATTCCTAATCTTATAAATTTCTCTTTAACTGAC
AATGTTTCTTCCTCGCAGAATAATGACGTACCAAGCAAGGGTTTTGAGAGCAAGGGGCAACGGAATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACCTCCTCCGCGAATACATGCAGAAAAATGATGCTCTTCTGCAAAGGCAGGCTTCATCAATTCGTAATCTGGAGGTACAGTTAGGTCAGCTAGCTAGTGATTT
CTCCGGAAGACAACAAGGATCCCTCCCAAGTAATGCAGAAACGCCAAATCAGGCAGGAGGATCTGGTAAAGAGAAGTGTCACGCGGTGACACTTCGCAGTGGAAGGAATT
TAACCATCCGCGATCCTGACGCTGAACGTAGTTACCCCACTTCTAACTCTACTGCCGAGATTGACAGTTCAAGTAGAATTCCTAATCTTATAAATTTCTCTTTAACTGAC
AATGTTTCTTCCTCGCAGAATAATGACGTACCAAGCAAGGGTTTTGAGAGCAAGGGGCAACGGAATCCATAG
Protein sequenceShow/hide protein sequence
MENLLREYMQKNDALLQRQASSIRNLEVQLGQLASDFSGRQQGSLPSNAETPNQAGGSGKEKCHAVTLRSGRNLTIRDPDAERSYPTSNSTAEIDSSSRIPNLINFSLTD
NVSSSQNNDVPSKGFESKGQRNP