CuGenDBv2

Gene ID	PI0005920
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	40S ribosomal protein S26
Genome location	chr03:24323149..24325152
RNA-Seq Expression	PI0005920
Synteny	PI0005920
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0019430 - removal of superoxide radicals (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004784 - superoxide dismutase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004138397.1 40S ribosomal protein S26-3 [Cucumis sativus]

1.6e-64

97.67

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQ GQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

XP_008456772.1 PREDICTED: 40S ribosomal protein S26-3-like [Cucumis melo]

3.7e-66

99.22

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

XP_022134511.1 40S ribosomal protein S26-1-like [Momordica charantia]

3.0e-63

97.62

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAP
        FIRRRDDAPKPGQPGQAPRVGAG AP
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAP

XP_022939944.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

6.0e-64

96.92

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQAPRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA

XP_038884330.1 40S ribosomal protein S26-3-like [Benincasa hispida]

7.5e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDG9 40S ribosomal protein S26

7.6e-65

97.67

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQ GQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

A0A1S3C4P8 40S ribosomal protein S26

1.8e-66

99.22

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

A0A5A7UA01 40S ribosomal protein S26

1.8e-66

99.22

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        FIRRRDDAPKPGQPGQ PRVGAGGAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

A0A6J1FIL8 40S ribosomal protein S26

2.9e-64

96.92

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQAPRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA

A0A6J1K0V7 40S ribosomal protein S26

2.9e-64

96.92

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR R+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA
        FIRRR+DAPKPGQPGQAPRVGAG GAPPRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAG-GAPPRA

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

2.0e-38

67.8

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAP
        F  +R  A +PG PG  P
Subjt:  FIRRRDDAPKPGQPGQAP

P49206 40S ribosomal protein S26-1

5.8e-54

83.2

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGA
        F RR++D PKPGQPGQAPR    GA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGA

P49216 40S ribosomal protein S26

4.8e-48

75.59

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQP-GQAPRVGAGGAP
        F RRR+D P+  +P G AP  G   AP
Subjt:  FIRRRDDAPKPGQP-GQAPRVGAGGAP

Q8LPJ7 40S ribosomal protein S26-2

1.3e-53

81.4

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        F RR++D PKPGQPGQAPR    GA   A
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

Q9LYK9 40S ribosomal protein S26-3

2.0e-54

83.97

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAP--PRA
        F RR++D PKP QPGQAPR  AGGAP  PRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAP--PRA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

9.2e-55

81.4

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA
        F RR++D PKPGQPGQAPR    GA   A
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAPPRA

AT2G40590.1 Ribosomal protein S26e family protein

4.1e-55

83.2

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGA
        F RR++D PKPGQPGQAPR    GA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGA

AT3G56340.1 Ribosomal protein S26e family protein

1.4e-55

83.97

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQR

Query:  FIRRRDDAPKPGQPGQAPRVGAGGAP--PRA
        F RR++D PKP QPGQAPR  AGGAP  PRA
Subjt:  FIRRRDDAPKPGQPGQAPRVGAGGAP--PRA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGTGGCCACGTGAAATTCATCCGCTGTTCCAACTGCGGCAAATGCTGCCCTAAGGATAAGGCCATCAA
GAGGTTCCTTGTCAGGAACATTGTGGAGCAAGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTTTATGATCAATACACTCTTCCTAAGCTTTATGCCAAGATGCAGTACT
GTGTTTCTTGTGCTATCCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATGCACCAAAG
CCTGGACAGCCAGGACAGGCCCCTCGTGTGGGAGCTGGTGGAGCTCCACCCCGTGCTTGA

mRNA sequence

Show/hide mRNA sequence

TCTGCAAATAAACCAAATTAGGGATTTCATTCGCTAGGTCACCTTCTGCTTCCCTTCATATAAAAGGATCACTATCACTCATTCATAAACCCTAATTCAGCCGACGAGCT
CTCTGATTCTCTCCGCTTCGCTCGTCCATCTGATACACTACAACCATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGTGGCCACGTGAAATTCATCCG
CTGTTCCAACTGCGGCAAATGCTGCCCTAAGGATAAGGCCATCAAGAGGTTCCTTGTCAGGAACATTGTGGAGCAAGCAGCTGTTAGGGATGTTCAGGAAGCCTGTGTTT
ATGATCAATACACTCTTCCTAAGCTTTATGCCAAGATGCAGTACTGTGTTTCTTGTGCTATCCACTCTCACGTTGTGAGGGTTCGATCACGCACTGACAGGAGGAACCGT
GAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATGCACCAAAGCCTGGACAGCCAGGACAGGCCCCTCGTGTGGGAGCTGGTGGAGCTCCACCCCGTGCTTGAAAGAA
CCCATTATATGCTATTTAATTTTCTCATGGTTTCTCAGATTTTGTGGACTTCAATTTTATCTAGGATTCTTCACTATATTTTGAGGGCTTTGTTTTGAGTATCGAATTAT
GCTGTACTTCTGAAATCTGATCAATTTTTGATTTAACAGGTTCTCTACTTAAATATTTTTATTGTTTTTTTGTCGTTAGATCTATTTTATCTATCTTGGCCCATTAATCT
CCTCTACTTTTTAGTCAACAATCAGATCATTCTAAAAAGAGTGAGTTTGTTCGTTCTGTTTGGAAAGTAAAGGAAAAACACGGTTGTACTAGTAATGTACAATATTTGTG
GTAGCTTTTATTTATATATTCGCCCTAGTTTAGGCAAATGCAGCTGTCCAAGTTGGGATTCTCGTGAGAAGTTCTTGTGAGTTGTAACTTTGTTCTGCTTGTATTCG

Protein sequence

Show/hide protein sequence

MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPK
PGQPGQAPRVGAGGAPPRA

PI0005920 (gene) of Melon (PI 482460) v1 genome