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PI0005944 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005944
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr05:22916576..22917785
RNA-Seq ExpressionPI0005944
SyntenyPI0005944
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037518.1 uncharacterized protein E6C27_scaffold277G001300 [Cucumis melo var. makuwa]3.8e-2065.48Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEKAD IDAV GR++GLPI+ELL RVD LE  T     INYE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE

KAA0039111.1 uncharacterized protein E6C27_scaffold84G002140 [Cucumis melo var. makuwa]3.8e-2049.63Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEKAD IDAV GR++GLPI+ELL RVD LE  T     INYE            HMEE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE

Query:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV
            V  L R +  + + I G   + R+  TL +V
Subjt:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV

KAA0062476.1 uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa]3.5e-2169.51Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRI-NYE
        MST KQ+GK  ADRLVE++EQM YL+E+ D++ FL+ R+EE+ EKADAIDAVT RLDGLPI+ELLTRVDTLE K  R  NYE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRI-NYE

TYK21576.1 uncharacterized protein E5676_scaffold275G00750 [Cucumis melo var. makuwa]8.6e-2062.35Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYEL
        MS+    GKA  DRLVE+EEQMLYL+E+PD++R+LE R++E+S+K DAIDAV GR++ LPI+ELL RVDTLEA T     +NYEL
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYEL

TYK25972.1 uncharacterized protein E5676_scaffold1441G00330 [Cucumis melo var. makuwa]6.5e-2049.63Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEKA+ IDAV GR++GLPIKELL RVD LE  T     INYE            HMEE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE

Query:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV
            V  L R +  + + I G   + R+  TL +V
Subjt:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV

TrEMBL top hitse value%identityAlignment
A0A5A7TBW6 Retrotrans_gag domain-containing protein1.9e-2049.63Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEKAD IDAV GR++GLPI+ELL RVD LE  T     INYE            HMEE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE

Query:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV
            V  L R +  + + I G   + R+  TL +V
Subjt:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV

A0A5A7VFC8 Senescence-specific cysteine protease sag394.1e-2063.1Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE
        MS+    GK+  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK D IDAV GR++GLPI+ELL RV+TLEA T     INYE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE

A0A5D3BQN3 Retrotrans_gag domain-containing protein1.9e-2065.48Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R+EE+SEKAD IDAV GR++GLPI+ELL RVD LE  T     INYE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYE

A0A5D3DR06 Retrotrans_gag domain-containing protein3.2e-2049.63Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE
        MS+    GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEKA+ IDAV GR++GLPIKELL RVD LE  T     INYE            HMEE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTT---RINYELSLKIRDVLQVPHMEE

Query:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV
            V  L R +  + + I G   + R+  TL +V
Subjt:  TRTIVQVLQRPEPEIGDRILGTRGEDRIPKTLRIV

A0A5D3DUL1 Uncharacterized protein1.7e-2169.51Show/hide
Query:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRI-NYE
        MST KQ+GK  ADRLVE++EQM YL+E+ D++ FL+ R+EE+ EKADAIDAVT RLDGLPI+ELLTRVDTLE K  R  NYE
Subjt:  MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRI-NYE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACAGTGAAACAGATGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGATGGAAATTCCGGACACCGTCCGCTTCCTGGAAGG
ACGGATCGAGGAAGTGTCCGAGAAAGCTGATGCTATTGATGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAA
AGACTACCAGAATAAACTATGAACTGAGTCTCAAGATACGAGACGTCCTTCAAGTTCCTCATATGGAGGAAACAAGAACAATCGTGCAGGTTCTCCAAAGGCCGGAGCCG
GAGATAGGCGATCGAATTCTGGGAACACGGGGCGAGGACAGAATCCCCAAAACTCTCAGAATCGTCCCCTTGCCTGTTTCATATGTAAGGGGCCACACCTGGCAAGAGAA
TGTCCGAACCGAACCGCCTTCAACGCCTTCCAGGCTGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACAGTGAAACAGATGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGATGGAAATTCCGGACACCGTCCGCTTCCTGGAAGG
ACGGATCGAGGAAGTGTCCGAGAAAGCTGATGCTATTGATGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAA
AGACTACCAGAATAAACTATGAACTGAGTCTCAAGATACGAGACGTCCTTCAAGTTCCTCATATGGAGGAAACAAGAACAATCGTGCAGGTTCTCCAAAGGCCGGAGCCG
GAGATAGGCGATCGAATTCTGGGAACACGGGGCGAGGACAGAATCCCCAAAACTCTCAGAATCGTCCCCTTGCCTGTTTCATATGTAAGGGGCCACACCTGGCAAGAGAA
TGTCCGAACCGAACCGCCTTCAACGCCTTCCAGGCTGCCTTAA
Protein sequenceShow/hide protein sequence
MSTVKQMGKAHADRLVEIEEQMLYLMEIPDTVRFLEGRIEEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKTTRINYELSLKIRDVLQVPHMEETRTIVQVLQRPEP
EIGDRILGTRGEDRIPKTLRIVPLPVSYVRGHTWQENVRTEPPSTPSRLP