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PI0005948 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005948
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCotton fiber protein
Genome locationchr10:20499617..20500088
RNA-Seq ExpressionPI0005948
SyntenyPI0005948
Gene Ontology termsNA
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034569.1 uncharacterized protein E6C27_scaffold65G005850 [Cucumis melo var. makuwa]1.4e-6285.53Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNY-RFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCISG-S
        MQSKRPPIFQKLS+FLKVSIFIAKMKRP+IP LLFLKKSS  KNFELLQHYNY  FVRDFQFSPSTTPLFRF NRG RRGLRR+ V S+LFPCRCI G S
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNY-RFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCISG-S

Query:  GGEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
        GGEKKE DGDY VEEAFPESLDWS     D+DDDSIDRRAEIFIQKFYADMKMERLASI
Subjt:  GGEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

KAE8648793.1 hypothetical protein Csa_009258 [Cucumis sativus]7.2e-5685.11Show/hide
Query:  VSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCI-SGSGGEKKEGDGDYGVEEAFP
        VSIF+AKMKRPIIP LLFLKKSSRMK+FELL HYNY FVRDF+FSPSTTPLFRF NRGGRRGLRR+ V S+LFPCRCI  GSGGEKKEGDGDYGVEEAFP
Subjt:  VSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCI-SGSGGEKKEGDGDYGVEEAFP

Query:  ESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
        ESLDWS      DDDDSIDRRAEIFIQKFY DMKMERL SI
Subjt:  ESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

XP_004135396.1 uncharacterized protein LOC101211232 [Cucumis sativus]1.7e-6586.08Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCI-SGSG
        MQSKRPPIFQKLSNFL+VSIF+AKMKRPIIP LLFLKKSSRMK+FELL HYNY FVRDF+FSPSTTPLFRF NRGGRRGLRR+ V S+LFPCRCI  GSG
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCI-SGSG

Query:  GEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
        GEKKEGDGDYGVEEAFPESLDWS      DDDDSIDRRAEIFIQKFY DMKMERL SI
Subjt:  GEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

XP_023542510.1 uncharacterized protein LOC111802395 [Cucurbita pepo subsp. pepo]1.8e-3862.82Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE
        MQ KR PI +KL NFLKVSIF+AKMK+PI P LLFLKKSS  + FELLQ         FQFSPSTTPLFR  RG RR LRR  VYS+LFPCRCI   GGE
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE

Query:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
             G   +E    E+LDWS   +  D+++SIDRRAE+FIQKFYADM+MERLA+I
Subjt:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

XP_038893176.1 uncharacterized protein LOC120082033 [Benincasa hispida]9.1e-5981.82Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE
        MQSKRPPIFQKLS+FLKVSIFIAKMKRPIIP LLFLKKSSR  +FEL  HYNY FVRDFQFSPSTTPLFRF R GRRGL R  VYS+LFPCRCI  S G 
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE

Query:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLA
        +KE DGDY VEEA PESLDWS      DDDDSIDRRAEIFIQKFYADMKMERLA
Subjt:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLA

TrEMBL top hitse value%identityAlignment
A0A5A7SZQ9 Uncharacterized protein6.6e-6385.53Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNY-RFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCISG-S
        MQSKRPPIFQKLS+FLKVSIFIAKMKRP+IP LLFLKKSS  KNFELLQHYNY  FVRDFQFSPSTTPLFRF NRG RRGLRR+ V S+LFPCRCI G S
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNY-RFVRDFQFSPSTTPLFRF-NRGGRRGLRRHFVYSLLFPCRCISG-S

Query:  GGEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
        GGEKKE DGDY VEEAFPESLDWS     D+DDDSIDRRAEIFIQKFYADMKMERLASI
Subjt:  GGEKKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

A0A5N6RE49 Uncharacterized protein1.8e-2845.91Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE
        M  KR P  QKLSN LKVSI +AKM++P+IP L+FLKK+ R+K F+LL+HYNY F+ ++QFS S+TPL  +++   +  R   +YS+ F C C+     E
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE

Query:  KKEGDGDYGVEE--AFPE-SLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
        K  GD DY +E   A P  +  +    D  D++DS+D+RAE FI++FY +M+M+R  S+
Subjt:  KKEGDGDYGVEE--AFPE-SLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

A0A6J1DC42 uncharacterized protein LOC1110187263.5e-3257.69Show/hide
Query:  PPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPST-TPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGEKKEG
        P +FQKLSNFLKVSIFI ++ +PIIP LLF KKS+  ++     +  Y FV  +QFSPST TPL  ++R GRR  RRH VYSLLFPCR    SG  +   
Subjt:  PPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPST-TPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGEKKEG

Query:  DGDYGVEEA------FPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLA
        DG+Y VEEA      F E+L+WS     +D+DDSID RAE+FIQKFYADMKME LA
Subjt:  DGDYGVEEA------FPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLA

A0A6J1G0E9 uncharacterized protein LOC1114495331.4e-3662.82Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE
        MQ KR PI QKL NFLKVSIF+AKMK+PI P LLFLKKSS  + FELLQ         FQFSPSTTPLFR  RG RR LRR  VYS+LFP RCI   GGE
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE

Query:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
             G   +E    E+ DWS   +  D++DSIDRRAE+FIQKFYADM+MERLA+I
Subjt:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

A0A6J1HX57 uncharacterized protein LOC1114674641.5e-3862.82Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE
        MQ KR PI QKL NFLK SIF+AKMK+PI P LLFLKKSS  K FELLQ         FQFSPSTTPLFR  RG RR LRR  VYS+LFPCRCI   GGE
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGE

Query:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI
         +  +G   +E    E+LD S   +  D++DSIDRRAE+FI+KFYADM+MERLA+I
Subjt:  KKEGDGDYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68350.1 unknown protein4.6e-1637.5Show/hide
Query:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLK-KSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFR-FNRG---GRRGLRRHFVYSLLFPCRCIS
        M  +R PIFQ++S  LK+SI    ++RPIIP L  +  K  R K  +LLQ +NY+F++++QFSPS+T   + + +     R GL+R  +Y LLF  +CI 
Subjt:  MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLK-KSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFR-FNRG---GRRGLRRHFVYSLLFPCRCIS

Query:  GSGGEKKEGDG------------DYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKME
           G   E D              Y +  A P + +     D   +DDSID +AE FI+KFY +M+M+
Subjt:  GSGGEKKEGDG------------DYGVEEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTAAAAGGCCACCCATTTTCCAAAAGCTTTCAAATTTTCTCAAAGTTTCAATCTTTATCGCTAAAATGAAAAGACCCATCATCCCAAACCTCCTTTTCCTCAA
GAAATCATCCAGGATGAAGAATTTTGAACTCCTTCAGCATTATAATTATAGGTTTGTTCGAGATTTTCAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAACAGAG
GCGGCCGTCGTGGCCTCCGCCGCCACTTCGTCTATTCGCTGCTGTTTCCATGTAGATGTATTAGTGGTTCTGGAGGTGAAAAAAAGGAAGGAGATGGAGATTACGGCGTA
GAGGAAGCTTTTCCGGAGTCGTTGGATTGGAGTAATGATGATGATGATGATGATGATGATGATTCGATTGATCGGAGGGCTGAGATTTTCATTCAGAAGTTCTATGCGGA
TATGAAAATGGAGAGGCTAGCATCCATTTGA
mRNA sequenceShow/hide mRNA sequence
AATGCAGTCTAAAAGGCCACCCATTTTCCAAAAGCTTTCAAATTTTCTCAAAGTTTCAATCTTTATCGCTAAAATGAAAAGACCCATCATCCCAAACCTCCTTTTCCTCA
AGAAATCATCCAGGATGAAGAATTTTGAACTCCTTCAGCATTATAATTATAGGTTTGTTCGAGATTTTCAATTCTCCCCTTCCACCACTCCTCTGTTTCGGTTCAACAGA
GGCGGCCGTCGTGGCCTCCGCCGCCACTTCGTCTATTCGCTGCTGTTTCCATGTAGATGTATTAGTGGTTCTGGAGGTGAAAAAAAGGAAGGAGATGGAGATTACGGCGT
AGAGGAAGCTTTTCCGGAGTCGTTGGATTGGAGTAATGATGATGATGATGATGATGATGATGATTCGATTGATCGGAGGGCTGAGATTTTCATTCAGAAGTTCTATGCGG
ATATGAAAATGGAGAGGCTAGCATCCATTTGA
Protein sequenceShow/hide protein sequence
MQSKRPPIFQKLSNFLKVSIFIAKMKRPIIPNLLFLKKSSRMKNFELLQHYNYRFVRDFQFSPSTTPLFRFNRGGRRGLRRHFVYSLLFPCRCISGSGGEKKEGDGDYGV
EEAFPESLDWSNDDDDDDDDDSIDRRAEIFIQKFYADMKMERLASI