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PI0005949 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0005949
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr03:16580556..16581353
RNA-Seq ExpressionPI0005949
SyntenyPI0005949
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037872.1 uncharacterized protein E6C27_scaffold36G00360 [Cucumis melo var. makuwa]1.3e-5259.07Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        +ND +T+AL Q TSD++K+GV EKMT PGSF +PCSI GMDLG  LC LGA+INL+PLSIFKKL I EVQ T MR Q ADRSI  P+GKIEDVLVKVDKF
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADREEEEVSKLLSLE-------------EFFEENLHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG
        LF ADF+ILDYEAD E   + + L L                F  N  I  + N+++  +   PLD   + EK  KPS+ E  ELELKPLPNHLKY YLG
Subjt:  LFPADFVILDYEADREEEEVSKLLSLE-------------EFFEENLHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG

Query:  ENDILPVIISTQLNA
        END LP IIS  LNA
Subjt:  ENDILPVIISTQLNA

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]1.2e-4759.59Show/hide
Query:  TSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYE
        TSD+FK+G+PEKMT+P SF +PCSIG MDLG ALC L  +INL+ LSIFKKL I EVQ T +RL FAD+ IA PE KI+D     D+     +F+  +Y 
Subjt:  TSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYE

Query:  ADREEEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNAA
           E+E   +L S EEFFEE+   +I++EVN+VS E+K E LDL  KGEK+ KPSIEE PELELK LPNHLKY YL END LPV IST L+ A
Subjt:  ADREEEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNAA

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]4.0e-4643.64Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        + + ETVALT+  S + KS +P K+ DPGSF +PCSIGG D+G ALC LGA+INL+P+SIFKKLGIGE + T + LQ ADRS+A PEGKIEDVLV+VDKF
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADR----------------------------------------------EEEEVSKLLSLEEFFEENLH-----------IIEEVNIV
        +FPADF+ILDYEADR                                              E EE S++  ++    E  H             +E+  +
Subjt:  LFPADFVILDYEADR----------------------------------------------EEEEVSKLLSLEEFFEENLH-----------IIEEVNIV

Query:  SGERKS------------------EPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQL
        S +  +                  E L+L     K  KPS +E P+LELKPLP+HLKYAYLGEND LPVII++ L
Subjt:  SGERKS------------------EPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQL

XP_038885994.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120076299 [Benincasa hispida]6.8e-4646.09Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        +N+ E +ALTQ  + +  + +P+K  DPGSF +P SIGG+D+G ALC LGA+INL+PLSIFKKLGIGE Q TF+ L   D++I  PEGKIEDVLVKVD F
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADRE--------------------EEEVSKLLSLE-----------------------EFFEENLHIIEEVNIVSGERKSEPLDLPTK
        +FPA+F+ILDYEADRE                    ++E++  +  E                       E  EE  H+ E + +    ++SE   L  +
Subjt:  LFPADFVILDYEADRE--------------------EEEVSKLLSLE-----------------------EFFEENLHIIEEVNIVSGERKSEPLDLPTK

Query:  GEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQL
          K  +PS+EE  ELELK LP+HLKYA+LG N+ LPVIIST L
Subjt:  GEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQL

XP_038889559.1 uncharacterized protein LOC120079447 [Benincasa hispida]5.5e-4851.17Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        +N+ E + L Q  + +  + +P+K  DPGSF +PCSIGG+ +G ALC+LGA+INL+ LSIFKKL IGE Q T + LQ  +R I  PEGKIEDVLVKVD F
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADREEEEVSKL------------LSLEEFFEENL-HIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG
        +FP DF+ILDYEAD++E + + L            L++ EF EE +  + E + +    ++ EP  L  +  K + PS+EE PELELKPLP+HLKYA+LG
Subjt:  LFPADFVILDYEADREEEEVSKL------------LSLEEFFEENL-HIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG

Query:  ENDILPVIISTQL
         N  LPVIIST L
Subjt:  ENDILPVIISTQL

TrEMBL top hitse value%identityAlignment
A0A5A7UF79 Uncharacterized protein6.0e-4859.59Show/hide
Query:  TSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYE
        TSD+FK+G+PEKMT+P SF +PCSIG MDLG ALC L  +INL+ LSIFKKL I EVQ T +RL FAD+ IA PE KI+D     D+     +F+  +Y 
Subjt:  TSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYE

Query:  ADREEEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNAA
           E+E   +L S EEFFEE+   +I++EVN+VS E+K E LDL  KGEK+ KPSIEE PELELK LPNHLKY YL END LPV IST L+ A
Subjt:  ADREEEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNAA

A0A5D3BCU9 Integrase7.1e-4158.33Show/hide
Query:  MTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYEADREEEEVSKLL
        MTD GSFM+ CSIG M LG +LC LGA+INL+PLSIFKK  IGEVQ T MRLQFADRSIA  + KI+D                        EE   +L 
Subjt:  MTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILDYEADREEEEVSKLL

Query:  SLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNA
        + E+F EE+   +I+EEVN+VSGE+K E LDL TKGEK+ K SIEE PELELKP  NHLKYAYLG ND L +IIST L+A
Subjt:  SLEEFFEEN--LHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNA

A0A5D3BDT2 RT_RNaseH domain-containing protein6.1e-5359.07Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        +ND +T+AL Q TSD++K+GV EKMT PGSF +PCSI GMDLG  LC LGA+INL+PLSIFKKL I EVQ T MR Q ADRSI  P+GKIEDVLVKVDKF
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADREEEEVSKLLSLE-------------EFFEENLHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG
        LF ADF+ILDYEAD E   + + L L                F  N  I  + N+++  +   PLD   + EK  KPS+ E  ELELKPLPNHLKY YLG
Subjt:  LFPADFVILDYEADREEEEVSKLLSLE-------------EFFEENLHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLG

Query:  ENDILPVIISTQLNA
        END LP IIS  LNA
Subjt:  ENDILPVIISTQLNA

A0A5D3BM69 Uncharacterized protein1.2e-4555.12Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        +ND + VALTQ T+++FK+GVP+KMTDPGSF +P SIG +DLG ALC L A +NL+PLSIFKKL IGEVQ T MRLQ                       
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADREEEEVSKLLSLEEFFEENL--HIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIIST
                     D  EE   +L S EEF EE+   + +EEVN   G+RK EPLDL TK EK+IKPSI+E  ELELKPLPNHLKYAYLGEND LP+IIS 
Subjt:  LFPADFVILDYEADREEEEVSKLLSLEEFFEENL--HIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIIST

Query:  QLNAA
         L+AA
Subjt:  QLNAA

A0A5D3E346 Uncharacterized protein6.4e-4261.73Show/hide
Query:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF
        MNDCETVALTQ TS+VFK+GV +KM DP SFM+ C IGGMDLG ALC +G +  L+PL IFKKL IGEVQ T MR+QFA+RSIA PEGKIEDVLVKVDKF
Subjt:  MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKF

Query:  LFPADFVILDYEADRE------EEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDL
        LF A FVILDY  + E      ++ +    +L+  FEE    +++EEV+ VSG RK + LDL
Subjt:  LFPADFVILDYEADRE------EEEVSKLLSLEEFFEEN--LHIIEEVNIVSGERKSEPLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGATTGCGAAACAGTGGCTCTGACGCAGGTAACAAGCGACGTTTTCAAAAGTGGGGTACCCGAGAAGATGACAGATCCTGGTAGCTTCATGTTACCTTGCTCAAT
AGGCGGGATGGATCTAGGTTGCGCATTATGCTATCTGGGAGCCAACATTAATTTGATACCTCTTTCTATCTTCAAAAAATTAGGGATAGGAGAGGTGCAATCAACTTTCA
TGAGGCTTCAATTCGCTGATCGATCCATTGCAACGCCTGAAGGAAAAATTGAAGATGTTTTGGTGAAGGTGGACAAATTTTTGTTTCCCGCCGACTTCGTCATTCTGGAT
TACGAAGCGGATCGAGAGGAAGAAGAAGTTTCTAAGCTGTTGAGCCTTGAAGAATTCTTTGAAGAAAATCTTCATATAATAGAGGAAGTAAACATCGTGTCTGGCGAAAG
AAAGTCAGAACCTTTGGATCTGCCAACCAAAGGCGAGAAGAGGATTAAGCCATCAATAGAGGAAACACCTGAATTAGAGCTAAAGCCTTTGCCAAACCACCTGAAATATG
CATATCTGGGGGAGAATGATATCCTGCCCGTCATAATCTCCACCCAGTTGAATGCCGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACGATTGCGAAACAGTGGCTCTGACGCAGGTAACAAGCGACGTTTTCAAAAGTGGGGTACCCGAGAAGATGACAGATCCTGGTAGCTTCATGTTACCTTGCTCAAT
AGGCGGGATGGATCTAGGTTGCGCATTATGCTATCTGGGAGCCAACATTAATTTGATACCTCTTTCTATCTTCAAAAAATTAGGGATAGGAGAGGTGCAATCAACTTTCA
TGAGGCTTCAATTCGCTGATCGATCCATTGCAACGCCTGAAGGAAAAATTGAAGATGTTTTGGTGAAGGTGGACAAATTTTTGTTTCCCGCCGACTTCGTCATTCTGGAT
TACGAAGCGGATCGAGAGGAAGAAGAAGTTTCTAAGCTGTTGAGCCTTGAAGAATTCTTTGAAGAAAATCTTCATATAATAGAGGAAGTAAACATCGTGTCTGGCGAAAG
AAAGTCAGAACCTTTGGATCTGCCAACCAAAGGCGAGAAGAGGATTAAGCCATCAATAGAGGAAACACCTGAATTAGAGCTAAAGCCTTTGCCAAACCACCTGAAATATG
CATATCTGGGGGAGAATGATATCCTGCCCGTCATAATCTCCACCCAGTTGAATGCCGCATAA
Protein sequenceShow/hide protein sequence
MNDCETVALTQVTSDVFKSGVPEKMTDPGSFMLPCSIGGMDLGCALCYLGANINLIPLSIFKKLGIGEVQSTFMRLQFADRSIATPEGKIEDVLVKVDKFLFPADFVILD
YEADREEEEVSKLLSLEEFFEENLHIIEEVNIVSGERKSEPLDLPTKGEKRIKPSIEETPELELKPLPNHLKYAYLGENDILPVIISTQLNAA