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PI0006004 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006004
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTPD1 protein-like protein 1-like
Genome locationchr04:29929932..29930357
RNA-Seq ExpressionPI0006004
SyntenyPI0006004
Gene Ontology termsGO:0001709 - cell fate determination (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60075.1 hypothetical protein Csa_001952 [Cucumis sativus]3.2e-3570.59Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        N EC +NDI ISQ+ +G  V GKQ W+ATI N C+CSQ S+K DCNGFNTV++VD SI+ VAGSVCLVN GQPIF S PISFTYAWDNAFPF PL SQ++
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

XP_016675584.1 uncharacterized protein At1g05835-like [Gossypium hirsutum]1.1e-2758Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS
        +C L D+ I QT +G  V+ K  WKAT+ N+CIC+QS LKL C+GF TV+ VD S++A  G+ CL+NGGQP+  S  +SF YAWD +FPFKPLSSQI+CS
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS

XP_017617499.1 PREDICTED: uncharacterized protein At1g05835-like [Gossypium arboreum]1.1e-2758Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS
        +C L D+ I QT +G  V+ K  WKAT+ N+CIC+QS LKL C+GF TV+ VD S++A  G+ CL+NGGQP+  S  +SF YAWD +FPFKPLSSQI+CS
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS

XP_031742370.1 uncharacterized protein At1g05835-like [Cucumis sativus]6.4e-2862.75Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        N +C LN+I ISQ+ +G  + G   WK TITNNCICSQS LKLDC GF T   +DPSI+A++ S CLVN GQPIF S PI+F YA    F FKPLSSQIS
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

XP_038896903.1 TPD1 protein homolog 1-like [Benincasa hispida]2.1e-3469Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS
        +C +NDI ISQ+ +G  V GKQ W+ATITNNC+CSQ S+K DCNGFN+V++VD SI+ VAGS CLVN GQP+F+S PISFTYAWDNAF FKPL SQ++CS
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS

TrEMBL top hitse value%identityAlignment
A0A0A0KLZ6 Uncharacterized protein3.1e-2862.75Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        N +C LN+I ISQ+ +G  + G   WK TITNNCICSQS LKLDC GF T   +DPSI+A++ S CLVN GQPIF S PI+F YA    F FKPLSSQIS
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

A0A0A0LDN0 Uncharacterized protein1.5e-3570.59Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        N EC +NDI ISQ+ +G  V GKQ W+ATI N C+CSQ S+K DCNGFNTV++VD SI+ VAGSVCLVN GQPIF S PISFTYAWDNAFPF PL SQ++
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

A0A0A0LEA1 Uncharacterized protein3.1e-4486.27Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        N ECVLNDIAISQT +G++V+GKQ+WKATITNNCIC QSSLKLDCNGFNTVQ VDPSI+AV+GSVCLVNGGQPIF+S PISFTYA DNAFPFKPLSSQIS
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

A0A0B0NVJ4 uncharacterized protein At1g05835-like5.3e-2858Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS
        +C L D+ I QT +G  V+ K  WKAT+ N+CIC+QS LKL C+GF TV+ VD S++A  G+ CL+NGGQP+  S  +SF YAWD +FPFKPLSSQI+CS
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQISCS

A0A7N2N519 Uncharacterized protein4.0e-2855.88Show/hide
Query:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        NG+C L+ + I Q+ +G VV+ K +W  TI N C+CSQS LKL CNGF TV+ VDPS+++ +G+ CLVN G P+  S  +SFTYAWD +F F+PLSSQI+
Subjt:  NGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  CS
        CS
Subjt:  CS

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058351.3e-0428.32Show/hide
Query:  IAISQTASGAVVKGK----------------QIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSV---CLVNGGQPIFESEPISFTYAWDN
        + + Q  SGA+ +GK                + ++  + N C +C   +L+L C GF     VDP+ + V  S    C+VN G P+   + +SF Y+  +
Subjt:  IAISQTASGAVVKGK----------------QIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSV---CLVNGGQPIFESEPISFTYAWDN

Query:  AFPFKPLSSQISC
         F  +PLS    C
Subjt:  AFPFKPLSSQISC

Q1G3T1 TPD1 protein homolog 14.2e-0628.43Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCI--CSQSSLKLDCNGFNTVQEVDPSII-AVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQI
        +C  +DI + Q ++  +  G   +   I N+C+  C+ + + + C  F++V+ V+P +   +    CLVN GQP+   + +SF YA  N+F +    + +
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCI--CSQSSLKLDCNGFNTVQEVDPSII-AVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQI

Query:  SC
        SC
Subjt:  SC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein9.6e-0628.32Show/hide
Query:  IAISQTASGAVVKGK----------------QIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSV---CLVNGGQPIFESEPISFTYAWDN
        + + Q  SGA+ +GK                + ++  + N C +C   +L+L C GF     VDP+ + V  S    C+VN G P+   + +SF Y+  +
Subjt:  IAISQTASGAVVKGK----------------QIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSV---CLVNGGQPIFESEPISFTYAWDN

Query:  AFPFKPLSSQISC
         F  +PLS    C
Subjt:  AFPFKPLSSQISC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown3.0e-0728.43Show/hide
Query:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCI--CSQSSLKLDCNGFNTVQEVDPSII-AVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQI
        +C  +DI + Q ++  +  G   +   I N+C+  C+ + + + C  F++V+ V+P +   +    CLVN GQP+   + +SF YA  N+F +    + +
Subjt:  ECVLNDIAISQTASGAVVKGKQIWKATITNNCI--CSQSSLKLDCNGFNTVQEVDPSII-AVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQI

Query:  SC
        SC
Subjt:  SC

AT4G32105.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein8.7e-1535.64Show/hide
Query:  GECVLNDIAISQTASGAVVKGKQIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        G+C LN +++ Q+ +G +V+ K  W+  +TN C  C     KL C GF +V  V  S+++ +G +CL+N G  IF      F Y WD +F  K +   I 
Subjt:  GECVLNDIAISQTASGAVVKGKQIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  C
        C
Subjt:  C

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein3.0e-1535.64Show/hide
Query:  GECVLNDIAISQTASGAVVKGKQIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS
        G+C LN +++ Q+ +G +V+ K  W+  +TN C  C   + +L C GFN+V  +D S++  +G  CLVN G+ I     I F Y WD +F  K +   + 
Subjt:  GECVLNDIAISQTASGAVVKGKQIWKATITNNC-ICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPFKPLSSQIS

Query:  C
        C
Subjt:  C


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTGATCGTCTAAAACAGGACATGATTAAAACATCTAATGACTCCCGAAATGGTGAATGTGTGTTGAATGACATTGCAATAAGCCAAACAGCAAGTGGAGCTGT
AGTGAAAGGGAAGCAAATATGGAAAGCCACAATTACAAACAATTGTATTTGTTCACAATCAAGTTTGAAACTGGATTGCAATGGATTCAATACAGTTCAAGAAGTTGATC
CATCCATAATAGCAGTTGCTGGGTCAGTGTGTTTGGTTAATGGTGGTCAACCAATCTTTGAATCTGAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTC
AAGCCTCTCTCCTCTCAAATTTCTTGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTGATCGTCTAAAACAGGACATGATTAAAACATCTAATGACTCCCGAAATGGTGAATGTGTGTTGAATGACATTGCAATAAGCCAAACAGCAAGTGGAGCTGT
AGTGAAAGGGAAGCAAATATGGAAAGCCACAATTACAAACAATTGTATTTGTTCACAATCAAGTTTGAAACTGGATTGCAATGGATTCAATACAGTTCAAGAAGTTGATC
CATCCATAATAGCAGTTGCTGGGTCAGTGTGTTTGGTTAATGGTGGTCAACCAATCTTTGAATCTGAACCCATCTCCTTCACTTATGCTTGGGACAATGCCTTCCCTTTC
AAGCCTCTCTCCTCTCAAATTTCTTGTTCTTAA
Protein sequenceShow/hide protein sequence
MKVDRLKQDMIKTSNDSRNGECVLNDIAISQTASGAVVKGKQIWKATITNNCICSQSSLKLDCNGFNTVQEVDPSIIAVAGSVCLVNGGQPIFESEPISFTYAWDNAFPF
KPLSSQISCS