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PI0006022 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006022
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiongag_pre-integrs domain-containing protein
Genome locationchr03:22027519..22027870
RNA-Seq ExpressionPI0006022
SyntenyPI0006022
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058944.1 hypothetical protein E6C27_scaffold98G001240 [Cucumis melo var. makuwa]7.2e-0776.6Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR
        MGSLQSHE RLKLFDSTPS+E FHMQS SR + GGRRGG G R NG+
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR

TXG68966.1 hypothetical protein EZV62_003901 [Acer yangbiense]5.7e-0448.61Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGR-GGRNGRFNTINLLQIEEEEEVQIEEEAEVVV
        MGSLQSHE RLK FD+TP E+AF   +Y  + S GRRGGR GGRN      N     +EE ++I ++  ++V
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGR-GGRNGRFNTINLLQIEEEEEVQIEEEAEVVV

TYK10980.1 hypothetical protein E5676_scaffold874G00100 [Cucumis melo var. makuwa]7.2e-0776.6Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR
        MGSLQSHE RLKLFDSTPS+E FHMQS SR + GGRRGG G R NG+
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR

XP_038877452.1 uncharacterized protein LOC120069734 [Benincasa hispida]6.3e-2780Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGRFN--------TINLLQIEEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFKQ
        MGSLQSHE RLKLFDS P E+AFHMQS SR RSGGRR GRG R NGR N        TINLLQIEE EEVQIE+EAEVVVVEIFLTYNVSIVDVMDIFKQ
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGRFN--------TINLLQIEEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFKQ

XP_038904397.1 uncharacterized protein LOC120090760 [Benincasa hispida]1.8e-0573.33Show/hide
Query:  RFNTINLLQIEEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFK
        R  TI LLQIEE+ +VQ+EEEAEV VV+IFLTYNVSIV+VM IF+
Subjt:  RFNTINLLQIEEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFK

TrEMBL top hitse value%identityAlignment
A0A5A7UV00 Uncharacterized protein3.5e-0776.6Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR
        MGSLQSHE RLKLFDSTPS+E FHMQS SR + GGRRGG G R NG+
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR

A0A5C7IKI5 gag_pre-integrs domain-containing protein2.8e-0448.61Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGR-GGRNGRFNTINLLQIEEEEEVQIEEEAEVVV
        MGSLQSHE RLK FD+TP E+AF   +Y  + S GRRGGR GGRN      N     +EE ++I ++  ++V
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGR-GGRNGRFNTINLLQIEEEEEVQIEEEAEVVV

A0A5D3CHY9 Uncharacterized protein3.5e-0776.6Show/hide
Query:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR
        MGSLQSHE RLKLFDSTPS+E FHMQS SR + GGRRGG G R NG+
Subjt:  MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGR-NGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCTCTTCAATCTCATGAGCATAGGTTGAAATTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTATTCTAGAAGACGATCAGGTGGAAGAAG
AGGTGGACGTGGCGGTAGAAATGGACGATTCAACACAATCAATCTTCTTCAAATAGAGGAAGAGGAAGAAGTTCAAATAGAGGAAGAGGCAGAAGTGGTGGTCGTGGAGA
TTTTTCTCACATACAATGTTTCAATTGTAGACGTTATGGACATTTTCAAGCAGATTGTTGGTCTAAGAAGGCTAATTCTAATCAAGTGGAAACCACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCTCTTCAATCTCATGAGCATAGGTTGAAATTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTATTCTAGAAGACGATCAGGTGGAAGAAG
AGGTGGACGTGGCGGTAGAAATGGACGATTCAACACAATCAATCTTCTTCAAATAGAGGAAGAGGAAGAAGTTCAAATAGAGGAAGAGGCAGAAGTGGTGGTCGTGGAGA
TTTTTCTCACATACAATGTTTCAATTGTAGACGTTATGGACATTTTCAAGCAGATTGTTGGTCTAAGAAGGCTAATTCTAATCAAGTGGAAACCACTCTAA
Protein sequenceShow/hide protein sequence
MGSLQSHEHRLKLFDSTPSEEAFHMQSYSRRRSGGRRGGRGGRNGRFNTINLLQIEEEEEVQIEEEAEVVVVEIFLTYNVSIVDVMDIFKQIVGLRRLILIKWKPL