; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006038 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006038
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationchr05:2260056..2260829
RNA-Seq ExpressionPI0006038
SyntenyPI0006038
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]1.3e-7597.18Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.4e-7799.3Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]2.9e-7292.96Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.0e-7292.25Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]2.2e-7291.55Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGSIMMILVLALGVLS+ANAQSA NVRATYHLYNPQ+INWDYLRASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGAS IV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQC+NGGLDLDVNVF+++DTNGNGNFRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein6.2e-7697.18Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        M KGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like6.6e-7899.3Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like6.6e-7899.3Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like1.4e-7292.96Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEK SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like4.9e-7392.25Show/hide
Query:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV
        MEKGS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNYQFVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN14.0e-5678.15Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRGRDSCG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYQFVNC
        +GNGN +GHLIVNYQFV+C
Subjt:  NGNGNFRGHLIVNYQFVNC

P09762 Wound-induced protein WIN28.3e-5475.63Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRGRDSCG+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYQFVNC
        +G GN +GHLIVNYQFVNC
Subjt:  NGNGNFRGHLIVNYQFVNC

P29062 Pathogenesis-related protein PR-4A8.9e-5670.8Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ
        + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        C+NGGLDLDVNVF ++DTNG G  +GHL VNY+FVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

P29063 Pathogenesis-related protein PR-4B5.2e-5670.8Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRG+DSCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC
        C+NGGLDLDVNVF ++DTNG G  +GHLIVNY+FVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC

P32045 Pathogenesis-related protein P22.3e-5677.95Show/hide
Query:  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDV
        ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDA+KPLEWRRRYGWTAFCGP GP G+ SCGRCLRVTNT TG  E VRIVDQC NGGLDLDV
Subjt:  VLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDV

Query:  NVFRRIDTNGNGNFRGHLIVNYQFVNC
        NVF R+DTNG G  RG+L VNY+FVNC
Subjt:  NVFRRIDTNGNGNFRGHLIVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.0e-4766.67Show/hide
Query:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRID
        +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRG+ SCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVFRRID

Query:  TNGNGNFRGHLIVNYQFVNC
        T+G G  +GHLIV+YQFV+C
Subjt:  TNGNGNFRGHLIVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTTTGAGCTTGGCGAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTACAACCC
ACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGCCGATACGGTTGGACTGCCTTTTGCGGCC
CTGTCGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCAGAAATAGTTAGAATTGTTGATCAATGTGCAAATGGAGGG
TTGGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAATGGAAACTTCAGAGGCCATCTTATTGTCAACTATCAATTTGTGAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
ACCTACAAACATTTACAAGTGAGAGAGTTATATTATTATATAGAATTAAGAAAAGCAAAGAATGGAGAAAGGAAGTATTATGATGATATTGGTGTTGGCTTTGGGGGTTT
TGAGCTTGGCGAATGCTCAAAGTGCCACAAATGTAAGAGCTACTTATCATTTGTACAACCCACAAGACATCAATTGGGACTACCTTAGGGCAAGTGTTTTTTGTGCAACA
TGGGATGCTAACAAGCCTTTGGAGTGGCGTCGCCGATACGGTTGGACTGCCTTTTGCGGCCCTGTCGGCCCTCGTGGCCGTGATTCTTGTGGACGTTGTTTGAGGGTGAC
TAACACTGAAACGGGAGCTTCAGAAATAGTTAGAATTGTTGATCAATGTGCAAATGGAGGGTTGGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAATG
GAAACTTCAGAGGCCATCTTATTGTCAACTATCAATTTGTGAATTGCTAAGATCACTATTTTAAATTTCATTTCATTCTTCCTGGAAGAAGAAAGAAAGCCATGTTCTAA
TGAATAAAGTATGAATAATAATGAAGTATGAAATAAAGGTTATTTTTCTTT
Protein sequenceShow/hide protein sequence
MEKGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGG
LDLDVNVFRRIDTNGNGNFRGHLIVNYQFVNC