CuGenDBv2

Gene ID	PI0006094
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome location	chr06:25612745..25613789
RNA-Seq Expression	PI0006094
Synteny	PI0006094
Gene Ontology terms	GO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process) GO:0009570 - chloroplast stroma (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]

5.9e-109

98.59

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQPE+FPIEKRRRSEI+RQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]

2.1e-106

96.24

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF ALNQPE+FPIEKRRRS+I+RQRKP+TEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]

1.2e-109

99.06

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPE+FPIEKRRRSEI+RQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_038903492.1 uncharacterized protein LOC120090072 isoform X1 [Benincasa hispida]

3.0e-97

94.06

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDPNFSALNQPESFPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  AR
        AR
Subjt:  AR

XP_038903493.1 uncharacterized protein LOC120090072 isoform X2 [Benincasa hispida]

2.1e-98

92.75

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDPNFSALNQPESFPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAI
        ARC   I
Subjt:  ARCRQAI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L6D8 Uncharacterized protein

1.0e-106

96.24

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF ALNQPE+FPIEKRRRS+I+RQRKP+TEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC103493403

5.7e-110

99.06

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPE+FPIEKRRRSEI+RQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

2.8e-109

98.59

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQPE+FPIEKRRRSEI+RQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC111438454

1.7e-93

85.45

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+K +S+ SESDPNFPSP+P+F ALNQPESFPIEKRRRSEI+RQR+P+ +I KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1JD53 uncharacterized protein LOC111483306

1.3e-93

84.98

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Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLPQS P+FT PLQIT KR LS+K +S+ SESDPNFPSPDP+F ALNQPESFP+EKRRRSEI+RQR+P+ EI KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G51100.1 unknown protein

3.7e-61

66.83

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Query:  LSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGWKRTKEINL
        LS+ N  + +P    SF   ++ T+K       N +  +   N  +P P        E FPIEKRRRSEIIR R     I KPEPPNFEIGWKRTKEINL
Subjt:  LSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGWKRTKEINL

Query:  EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAIL
        EKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ QA+ARCRQAIL
Subjt:  EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAIL

Query:  VANSF
        VANSF
Subjt:  VANSF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCTCACACCTCCATTTCCTCTCTACTCCAAATCCCATTCTTCTTCTCCCTCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCT
CTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCCAACTTCAGCGCCCTTAACCAACCAGAAAGCTTCCCAATAGAGAAACGAA
GAAGATCCGAAATAATCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAG
CCGATCGGGTGGATGATAATGGATTTTCTGGAGAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCCAAAGTGGGAGAGATTGTGGCGGAGAG
GGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGA
AGGCGGCTGTGAAGGATGAGACATTGAGCGAACGGCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGA

mRNA sequence

Show/hide mRNA sequence

AATAGAGGTTAGAGTCTGAGCCCAACATAAGTATTCATTTTCCGAAAAGATATTTTTGATGTATGAGAAAGAGCATAAAACTATCCAACAATGCTAAAAAAGAATAAACT
TATCTACTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCTGTTCTTCCATGGCTTCCTCACACCTCCATTTCCTCTCTACTCCAAATCCCATTCTTCTTCTCCC
TCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAG
ATCCCAACTTCAGCGCCCTTAACCAACCAGAAAGCTTCCCAATAGAGAAACGAAGAAGATCCGAAATAATCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAG
CCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAGAAGTTAGAAGGGTTAATGGAGAG
GGAATTTGGGTCGACGGAGTTGCTAGCCAAAGTGGGAGAGATTGTGGCGGAGAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGG
TAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGGCTTGGTCAGGCTAAAGCAAGG
TGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGAGTTATAACAAATTGTTGAGGCAATGTTTTATATTTTGCTTCATTTGTCTTTGTAAAGTGTATCAATCCATTTTC
ATCATAATTCAAATTTAGTTTAGAATGTGCTTTGAATCATGTGGTTTGTGCCTAATATTATGTGTTTGTCTTAATAATTTGTAGTGTTATTTTGATAAGGAGTTTTGGGT
TAGTTGGGAATTATTGTAATGCAACGCTAATACCATATTTCTTTTGTTCGTACTA

Protein sequence

Show/hide protein sequence

MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPESFPIEKRRRSEIIRQRKPTTEIAKPEPPNFEIGWKRTKEINLEK
PIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

PI0006094 (gene) of Melon (PI 482460) v1 genome