; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006095 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006095
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:15203075..15203650
RNA-Seq ExpressionPI0006095
SyntenyPI0006095
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]1.4e-4862.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  LQSI+ ESEQLSILSYEK EAID++ELE+A+LQDE N LE+TPAI EEA EALATVR+SMEAA EE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

KAA0053733.1 hypothetical protein E6C27_scaffold135G001100 [Cucumis melo var. makuwa]1.4e-4862.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+LQDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]1.4e-4862.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+LQDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]2.3e-5172.56Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLKRE---------------DAKVIQERATQLSLEKKELESILQSIHTESEQ
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLKR                DAKVIQER T+LSLE+KELE  L+SI+ ESEQ
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLKRE---------------DAKVIQERATQLSLEKKELESILQSIHTESEQ

Query:  LSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        LSILS EK EAI+++ELE+A+ QDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  LSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]5.3e-4862.3Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+L+DE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

TrEMBL top hitse value%identityAlignment
A0A5A7U8X8 PMD domain-containing protein6.7e-4962.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  LQSI+ ESEQLSILSYEK EAID++ELE+A+LQDE N LE+TPAI EEA EALATVR+SMEAA EE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

A0A5A7UCU7 Uncharacterized protein6.7e-4962.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+LQDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

A0A5A7V4F4 PMD domain-containing protein2.6e-4862.3Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+L+DE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

A0A5A7VHW8 PMD domain-containing protein6.7e-4962.83Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLK                                          R DAKVI
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLK------------------------------------------REDAKVI

Query:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        QER  +LSLE+KELE  L+SI+ ESEQLSILS EK EAID++ELE+A+LQDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  QERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

A0A5D3BQ12 PMD domain-containing protein1.1e-5172.56Show/hide
Query:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLKRE---------------DAKVIQERATQLSLEKKELESILQSIHTESEQ
        MWEDI+DKIMRTPFEYIPRLRPEIATVLSGI KI AD LT LEEYLNSYLKR                DAKVIQER T+LSLE+KELE  L+SI+ ESEQ
Subjt:  MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLKRE---------------DAKVIQERATQLSLEKKELESILQSIHTESEQ

Query:  LSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL
        LSILS EK EAI+++ELE+A+ QDE N LE+TPAITEEA EALATVR+SMEAAREE +NFKW+L
Subjt:  LSILSYEKNEAIDKKELEIAQLQDEANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGAGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATTCAAGCAGA
CAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGAAGATGCCAAAGTTATTCAAGAGAGGGCTACACAATTATCCTTGGAAAAGAAAGAACTGGAGA
GCATACTTCAGAGTATACATACTGAGTCTGAACAACTATCCATCTTATCTTATGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTCAGCTCCAGGATGAA
GCCAATGCCCTTGAAAACACCCCTGCTATTACTGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGTATGGAGGCCGCACGAGAAGAACTTAGGAACTTCAAGTG
GAAGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGAGGACATTCGAGACAAGATCATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAACGGTTCTTTCAGGAATTGCAAAGATTCAAGCAGA
CAACTTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTAAGAGGGAAGATGCCAAAGTTATTCAAGAGAGGGCTACACAATTATCCTTGGAAAAGAAAGAACTGGAGA
GCATACTTCAGAGTATACATACTGAGTCTGAACAACTATCCATCTTATCTTATGAGAAAAATGAGGCCATAGATAAGAAGGAATTGGAGATTGCTCAGCTCCAGGATGAA
GCCAATGCCCTTGAAAACACCCCTGCTATTACTGAAGAAGCCACTGAGGCCTTGGCTACGGTTCGTAAGAGTATGGAGGCCGCACGAGAAGAACTTAGGAACTTCAAGTG
GAAGCTTTAA
Protein sequenceShow/hide protein sequence
MWEDIRDKIMRTPFEYIPRLRPEIATVLSGIAKIQADNLTPLEEYLNSYLKREDAKVIQERATQLSLEKKELESILQSIHTESEQLSILSYEKNEAIDKKELEIAQLQDE
ANALENTPAITEEATEALATVRKSMEAAREELRNFKWKL