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PI0006144 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006144
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionpolcalcin Syr v 3-like
Genome locationchr03:18538501..18539133
RNA-Seq ExpressionPI0006144
SyntenyPI0006144
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646616.1 hypothetical protein Csa_005682 [Cucumis sativus]3.0e-3289.87Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKE
        MADSDGN++ECERIFKRFD+NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKD NG+ISLEELCDFQRANPDLMKE
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKE

XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]1.1e-3494.05Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDG K+ECERIFKRFDINGDGKISLSELETALHALGSS+PEEV RRMSEIDKD NGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]2.3e-3285.71Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSSSPEEVRRRMSEIDKD NGFISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]6.7e-3284.52Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSSSPEEVRRRMSEIDKD NGFISL+ELC+FQRANPDLMKEVC+RL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]6.0e-3388.1Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MADS+G + ECERIFKRFD +GDGKISLSELE+AL ALGSSSPEEVRRRMSEIDKD NGFISL+ELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein1.1e-3590.48Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDGN++ECERIFKRFD+NGDGKISLSELE ALHALGSS+PEEV RRMSEIDKD NG+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like5.3e-3594.05Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDG K+ECERIFKRFDINGDGKISLSELETALHALGSS+PEEV RRMSEIDKD NGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like5.3e-3594.05Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MADSDG K+ECERIFKRFDINGDGKISLSELETALHALGSS+PEEV RRMSEIDKD NGFISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like2.1e-3184.52Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MAD   N+ ECERIF RFD NGDG+ISLSELE+AL ALGSSSPEEVRRRMSEIDKD +G+ISLEELCDFQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like1.1e-3285.71Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL
        MA+S+  + ECERIF RFD NGDGKISLSELE ALHALGSSSPEEVRRRMSEIDKD NGFISL+ELC+FQRANPDLMKEVCKRL
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 32.6e-1859.76Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        MAD      E ERIFKRFD NGDGKIS SEL   L  LGS +PEE++R M+EID D +GFIS EE   F RAN  L+K+V K
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

O82040 Polcalcin Phl p 75.7e-1863.01Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        + ERIFKRFD NGDGKISLSEL  AL  LGS+S +EV+R M+EID D +GFI   E   F  ANP LMK+V K
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

P58171 Polcalcin Syr v 32.6e-1864.38Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        E ERIFKRFD NGDGKIS SEL   L  LGS +PEE++R M+EID D +GFIS EE  DF RAN  L+K+V K
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

Q39419 Polcalcin Bet v 42.6e-1858.75Show/hide
Query:  DSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        D   +K E ERIFKRFD NGDGKIS +EL  AL  LGS +P+EV+  M+EID D +GFIS +E  DF RAN  L+K+V K
Subjt:  DSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

Q84V36 Polcalcin Che a 32.6e-1860Show/hide
Query:  DSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        D+  +  + ERIFKRFD NGDGKIS SEL  AL  LGS +P+EVRR M+EID D +GFIS +E  DF RAN  L+K+V K
Subjt:  DSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein5.0e-0942.65Show/hide
Query:  NKVECERIFKRFDINGDGKISLSELETALHALGSSSPE-EVRRRMSEIDKDRNGFISLEELCDFQRAN
        N  E +++F +FD NGDGKIS+ EL     A+G+S  E E+ R + E+D DR+G+I+L+E     R++
Subjt:  NKVECERIFKRFDINGDGKISLSELETALHALGSSSPE-EVRRRMSEIDKDRNGFISLEELCDFQRAN

AT1G24620.1 EF hand calcium-binding protein family3.8e-0941.79Show/hide
Query:  ECERIFKRFDINGDGKISLSELETALHALGSSSP-EEVRRRMSEIDKDRNGFISLEELCDFQRANPD
        E E +FK+FD+NGDGKIS  EL   + +LG   P EE+ + ++EID+  +G+I+ EE  +      D
Subjt:  ECERIFKRFDINGDGKISLSELETALHALGSSSP-EEVRRRMSEIDKDRNGFISLEELCDFQRANPD

AT3G03430.1 Calcium-binding EF-hand family protein2.9e-1754.88Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        MAD+   K E +RIFK+FD NGDGKIS +EL  AL  LGS + E+++R M+EID D +G+IS +E  DF  AN  LMK+V K
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

AT5G17480.1 pollen calcium-binding protein 12.2e-1756.1Show/hide
Query:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK
        MAD+   K E +RIFK+FD NGDGKIS +ELE AL  LGS + ++V+R M+EID D +G IS +E  DF  AN  LMK+V K
Subjt:  MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCK

AT5G37770.1 EF hand calcium-binding protein family2.2e-0947.54Show/hide
Query:  GNKVECERIFKRFDINGDGKISLSELETALHALG-SSSPEEVRRRMSEIDKDRNGFISLEE
        G+  + +++F+RFD NGDGKIS+ EL+  + AL  ++SPEE    M + D D NGFI L+E
Subjt:  GNKVECERIFKRFDINGDGKISLSELETALHALG-SSSPEEVRRRMSEIDKDRNGFISLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTCAGATGGAAACAAAGTGGAATGCGAGCGAATCTTTAAGCGGTTCGATATCAACGGCGACGGAAAGATCTCGCTGTCGGAGCTTGAGACCGCTCTGCACGC
CCTTGGCTCCTCCTCGCCGGAAGAGGTTCGACGACGAATGTCGGAGATCGACAAGGACCGAAACGGTTTCATTTCGCTTGAGGAACTCTGCGATTTTCAGAGGGCTAATC
CTGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
CTCTAATCTCCGATTCTAAAGCTCTTTCTGTTATTACAATTCCACATTACAAAATCCAATCCCAAAAAAACATAAAGAATATAAAACAATACAAGGAAAAAAAAAAAAAA
TGGCAGACTCAGATGGAAACAAAGTGGAATGCGAGCGAATCTTTAAGCGGTTCGATATCAACGGCGACGGAAAGATCTCGCTGTCGGAGCTTGAGACCGCTCTGCACGCC
CTTGGCTCCTCCTCGCCGGAAGAGGTTCGACGACGAATGTCGGAGATCGACAAGGACCGAAACGGTTTCATTTCGCTTGAGGAACTCTGCGATTTTCAGAGGGCTAATCC
TGATTTGATGAAGGAGGTTTGCAAGAGGCTTTAGGTTTGTTGAATTGGAATTCAGAATGTGATTGTAAAATTTTCTCCATTGTGCCCTAATTCTTTGTATGTGATGTGTT
TCATTATATTCTTTTTCTTTTCTGTTTTTAATTACTTTTTGTACCTTTGATCGAATTGTTCAATTCATATTCGATCCCTTTACTGAATTGGGAATTCTTATGAATTTTGT
AACTAGTCGATGGGAATTTTCTTCTGCTATACTATACATACTACCTTGTCCTTATGCGACGAGGAATAAATGATGAATGTGTC
Protein sequenceShow/hide protein sequence
MADSDGNKVECERIFKRFDINGDGKISLSELETALHALGSSSPEEVRRRMSEIDKDRNGFISLEELCDFQRANPDLMKEVCKRL