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PI0006151 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006151
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTropomyosin
Genome locationchr11:6832312..6832623
RNA-Seq ExpressionPI0006151
SyntenyPI0006151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061866.1 tropomyosin [Cucumis melo var. makuwa]5.5e-3690.2Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKSRRGSKEGK  S SDSSGNGN+GDA AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG GG
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GG
         G
Subjt:  GG

KAE8645885.1 hypothetical protein Csa_017706 [Cucumis sativus]2.3e-3487.38Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKS R SKEGK  SSSDSSGNGN G+  AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG G 
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GGD
        GGD
Subjt:  GGD

KAG6570682.1 hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sororia]7.7e-3086.27Show/hide
Query:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAG-ATAVAAVAVTAVTMDAFD-DDGGSTHVHGGEGGGGGG
        SSKICFCIPRHKN HK DGGSEKS+KSKPSRRKS  G+KEGK  SSSDSSGNGNTG ASAAG A AVAA+AVTAVTMDA D DDGGSTHVHGGEGGGGGG
Subjt:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAG-ATAVAAVAVTAVTMDAFD-DDGGSTHVHGGEGGGGGG

Query:  GD
        GD
Subjt:  GD

KAG7010529.1 hypothetical protein SDJN02_27323, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-3187.25Show/hide
Query:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAG-ATAVAAVAVTAVTMDAFD-DDGGSTHVHGGEGGGGGG
        SSKICFCIPRHKN HK DGGSEKS+KSKPSRRKS  G+KEGK  SSSDSSGNGNTGDASAAG A AVAA+AVTAVTMDA D DDGGSTHVHGGEGGGGGG
Subjt:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAG-ATAVAAVAVTAVTMDAFD-DDGGSTHVHGGEGGGGGG

Query:  GD
        GD
Subjt:  GD

TYK15390.1 tropomyosin [Cucumis melo var. makuwa]5.5e-3690.2Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKSRRGSKEGK  S SDSSGNGN+GDA AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG GG
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GG
         G
Subjt:  GG

TrEMBL top hitse value%identityAlignment
A0A0A0KFD0 Uncharacterized protein1.1e-3487.38Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKS R SKEGK  SSSDSSGNGN G+  AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG G 
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GGD
        GGD
Subjt:  GGD

A0A5A7V5U9 Tropomyosin2.7e-3690.2Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKSRRGSKEGK  S SDSSGNGN+GDA AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG GG
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GG
         G
Subjt:  GG

A0A5D3CVK1 Tropomyosin2.7e-3690.2Show/hide
Query:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG
        MESSSKICFCIPRHKNGHKADGGSEKS+KSKPSRRKSRRGSKEGK  S SDSSGNGN+GDA AA ATAVAAVAVTAVTMDA DDDGGSTHVHGGEGG GG
Subjt:  MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGG

Query:  GG
         G
Subjt:  GG

A0A6J1D515 circumsporozoite protein-like2.0e-2373.58Show/hide
Query:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGA---TAVAAVAV---TAVTMDAFDDDGGSTHVHGGEGG
        S+KICFCIPRHKNGHKA+GGSEKS+KSKPSRRKSRRG K GK  SSSDSSG+GNT   +AAG     AVAAV V   TA TMDA +DDGGS H HGG GG
Subjt:  SSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGA---TAVAAVAV---TAVTMDAFDDDGGSTHVHGGEGG

Query:  GGGGGD
         GGGGD
Subjt:  GGGGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCTCATCAAAGATTTGTTTCTGTATTCCCCGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTACCAAATCTAAGCCTTCTCGTCGCAAATC
TCGTCGAGGCTCAAAAGAAGGTAAGCCATTGTCTAGCAGTGATAGTAGTGGAAATGGAAACACAGGTGATGCAAGTGCAGCCGGTGCCACTGCCGTGGCTGCTGTTGCAG
TCACGGCAGTGACCATGGATGCATTTGATGATGACGGTGGCAGTACCCATGTCCACGGTGGTGAGGGAGGCGGCGGGGGTGGTGGAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCTCATCAAAGATTTGTTTCTGTATTCCCCGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTACCAAATCTAAGCCTTCTCGTCGCAAATC
TCGTCGAGGCTCAAAAGAAGGTAAGCCATTGTCTAGCAGTGATAGTAGTGGAAATGGAAACACAGGTGATGCAAGTGCAGCCGGTGCCACTGCCGTGGCTGCTGTTGCAG
TCACGGCAGTGACCATGGATGCATTTGATGATGACGGTGGCAGTACCCATGTCCACGGTGGTGAGGGAGGCGGCGGGGGTGGTGGAGATTAG
Protein sequenceShow/hide protein sequence
MESSSKICFCIPRHKNGHKADGGSEKSTKSKPSRRKSRRGSKEGKPLSSSDSSGNGNTGDASAAGATAVAAVAVTAVTMDAFDDDGGSTHVHGGEGGGGGGGD