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PI0006162 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006162
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:18055605..18056901
RNA-Seq ExpressionPI0006162
SyntenyPI0006162
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.6e-7272.82Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRDVADD QQVL ICNNN+R++EEIH MY +PIVPP ++ GRV+VEE ELDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN
        HNVEE+ P TQ Q+QTGYGSPM+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H +    GEHNEYLY+EAP +V D QEYQQEPEN
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN

Query:  QKELGQ
        Q+EL Q
Subjt:  QKELGQ

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]7.1e-7681.36Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+ + PSS YMDVGPS  YM    HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-8077.18Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ L ICNNNERY+EEIH MYD+PIVPPPV+ G VRVEE ELD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN
        HNVEE+P  TQTQSQTGYGSPM MMP F AGYCD EVG GY D+ VGPSSSY+DV PSTSYM    HGH RG GEHNEYLY+EAP DV D QEYQQEPEN
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN

Query:  QKELGQ
        Q++  Q
Subjt:  QKELGQ

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.3e-7781.92Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+ + PSS YMDVGPS  YM    HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.2e-8477.51Show/hide
Query:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVL ICNNNERY+E+IH +YD+PIVPPPV+  R RVEE ELD
Subjt:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELD

Query:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQE
        EVYHNVEE+PP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDVGPSTSYM    +GHGRG GEHNEYLY+EAP DV D QEYQQE
Subjt:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQE

Query:  PENQKELGQ
        P+NQ++  Q
Subjt:  PENQKELGQ

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.8e-7272.82Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY
        +A G  IQQFD DVTQEYIH Y NITRLYIT+ GA     RSNN RLRDVADD QQVL ICNNN+R++EEIH MY +PIVPP ++ GRV+VEE ELDEVY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN
        HNVEE+ P TQ Q+QTGYGSPM+MMP FG GYCD EV T Y DS VGPSSSYMDVGPSTSYMHGH H +    GEHNEYLY+EAP +V D QEYQQEPEN
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN

Query:  QKELGQ
        Q+EL Q
Subjt:  QKELGQ

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.4e-7681.36Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRP AAVGHLRSNN RLRDVADDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+ + PSS YMDVGPS  YM    HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-8077.18Show/hide
Query:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY
        +A   SIQQFD+DVTQEYIHWY+NITRLYITRPGAAVG  RSNN RLRDVADD QQ L ICNNNERY+EEIH MYD+PIVPPPV+ G VRVEE ELD+VY
Subjt:  IATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVY

Query:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN
        HNVEE+P  TQTQSQTGYGSPM MMP F AGYCD EVG GY D+ VGPSSSY+DV PSTSYM    HGH RG GEHNEYLY+EAP DV D QEYQQEPEN
Subjt:  HNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQEPEN

Query:  QKELGQ
        Q++  Q
Subjt:  QKELGQ

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.0e-7781.92Show/hide
Query:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV
        G SIQQFD DVTQEYIHWYNNITRLYITRPGAAVGHLRSNN RLRDVADDPQQVL+ICNNN+RY+EEIH MYD+ IVPPPV+ GRVRVEE ELDEVYHNV
Subjt:  GASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELDEVYHNV

Query:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL
        EE+PP TQTQSQTGYGSPM MMP FGAGY DSEVGTGY D+ + PSS YMDVGPS  YM    HGH RG GEHN+YL
Subjt:  EEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein1.5e-8477.51Show/hide
Query:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELD
        RRF+    SIQQFD DVTQEYIH YNNITRLYITRPGA VGHLRSNN RLRDV +DPQQVL ICNNNERY+E+IH +YD+PIVPPPV+  R RVEE ELD
Subjt:  RRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMGRVRVEEPELD

Query:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQE
        EVYHNVEE+PP TQTQSQTGYGSPM MMP FGAGYCDSEV  GY D+ VGP SSYMDVGPSTSYM    +GHGRG GEHNEYLY+EAP DV D QEYQQE
Subjt:  EVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAP-DVPDPQEYQQE

Query:  PENQKELGQ
        P+NQ++  Q
Subjt:  PENQKELGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCAATTCAACAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCGCAACAAGTCCTTCATATATGTAATAATAATGAGAGGTACATAGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTT
ACATGCATGGACATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTGACGTTCCAGATCCACAAGAGTACCAACAAGAACCA
GAGAATCAAAAGGAGCTAGGGCAACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCACAACTAAGACATGCAAACGATCATCTACTACCTGGACGAGCACACGGTTCACGAAGATTCATTGCCACTGGAGCTTCAATTCAACAATTTGATCAGGATGT
GACTCAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCTGTGGGTCATCTGAGATCGAACAACAGAAGACTTCGTGATGTTG
CAGATGATCCGCAACAAGTCCTTCATATATGTAATAATAATGAGAGGTACATAGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGGA
CGTGTTCGAGTGGAAGAACCTGAACTCGATGAAGTTTACCATAACGTAGAAGAAATACCTCCAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGAT
GATGCCAGCTTTTGGAGCAGGATATTGTGATTCTGAGGTCGGTACAGGATATAATGACTCAAGGGTTGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTT
ACATGCATGGACATGGACATGGACACGGACGCGGCCGCGGAGAACATAACGAATATCTGTACTATGAAGCACCTGACGTTCCAGATCCACAAGAGTACCAACAAGAACCA
GAGAATCAAAAGGAGCTAGGGCAACCATGA
Protein sequenceShow/hide protein sequence
MAPQLRHANDHLLPGRAHGSRRFIATGASIQQFDQDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNRRLRDVADDPQQVLHICNNNERYIEEIHYMYDVPIVPPPVNMG
RVRVEEPELDEVYHNVEEIPPVTQTQSQTGYGSPMMMMPAFGAGYCDSEVGTGYNDSRVGPSSSYMDVGPSTSYMHGHGHGHGRGRGEHNEYLYYEAPDVPDPQEYQQEP
ENQKELGQP