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PI0006166 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006166
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:9861925..9866251
RNA-Seq ExpressionPI0006166
SyntenyPI0006166
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0010073 - meristem maintenance (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD  IVPPPVHRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]8.0e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVA+DPQQVLDICNNNERYMEEIH MYD PIVPP  HRG VRVEE +LDEVYHNVEEVPP+TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.2e-2672.04Show/hide
Query:  PYRVLRSSACLFLSRVPLDCERSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        P RVLR         +P    RSNN RLRDVADDPQQVLDICNNNERYMEEIH MYD PIVP P+HRG +RVEE +LDEVYHNVEEVPP T+T
Subjt:  PYRVLRSSACLFLSRVPLDCERSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.0e-2586.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVA+DPQQVLDICNNNERYMEEIH MYD PIVPP  HRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.8e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD  IVPPPVHRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD  IVPPPVHRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein3.9e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVA+DPQQVLDICNNNERYMEEIH MYD PIVPP  HRG VRVEE +LDEVYHNVEEVPP+TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X26.0e-2772.04Show/hide
Query:  PYRVLRSSACLFLSRVPLDCERSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        P RVLR         +P    RSNN RLRDVADDPQQVLDICNNNERYMEEIH MYD PIVP P+HRG +RVEE +LDEVYHNVEEVPP T+T
Subjt:  PYRVLRSSACLFLSRVPLDCERSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein5.1e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVA+DPQQVLDICNNNERYMEEIH MYD PIVPP  HRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-2686.11Show/hide
Query:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT
        RSNN RLRDVADDPQQVL+ICNNN+RYMEEIH MYD  IVPPPVHRG VRVEE +LDEVYHNVEEVPP TQT
Subjt:  RSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATGTGGATGACATGAAAGCATTTCTAGACGTCCCGGACGAGCTTAAATTAGATTACTGCACGGCCCCGAGCAGCCATAGTTTCTCTCCAGAAATCATTTTCGC
CGCGCGTTGCCTTGCCGTCCGGAAGTCCTTCTTCGCCTGCCCGTACCGCCGGAAACCCTTGCTGCTTGCTTGTGTGGCCTGGGTTGGTTCTTTTGCAAGGTGGTGCAGTT
CCCCTTGTTCGCAAGCTGTGAAGCTCAGCCCGCGAGCTAAGGAGTTAGTTCACGAGCTTCCCTTGCCGCCAGCCGTGGTCTGCGTTCAGCCTCGCGTTTCGCCGAGTTGC
CTTTGTCCGCGAGCTGAGGAGCCTTACCGTGTTCTGAGGTCCTCTGCCTGCCTCTTCTTATCGCGAGTTCCCTTGGATTGCGAGAGATCGAACAACAAAAGACTTCGTGA
TGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGAACCTATTGTACCTCCACCAGTTCATA
GGGGACATGTTCGAGTGGAAGAAACTAAACTCGATGAAGTTTACCATAATGTAGAAGAAGTACCTCCAGTGACACAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATGTGGATGACATGAAAGCATTTCTAGACGTCCCGGACGAGCTTAAATTAGATTACTGCACGGCCCCGAGCAGCCATAGTTTCTCTCCAGAAATCATTTTCGC
CGCGCGTTGCCTTGCCGTCCGGAAGTCCTTCTTCGCCTGCCCGTACCGCCGGAAACCCTTGCTGCTTGCTTGTGTGGCCTGGGTTGGTTCTTTTGCAAGGTGGTGCAGTT
CCCCTTGTTCGCAAGCTGTGAAGCTCAGCCCGCGAGCTAAGGAGTTAGTTCACGAGCTTCCCTTGCCGCCAGCCGTGGTCTGCGTTCAGCCTCGCGTTTCGCCGAGTTGC
CTTTGTCCGCGAGCTGAGGAGCCTTACCGTGTTCTGAGGTCCTCTGCCTGCCTCTTCTTATCGCGAGTTCCCTTGGATTGCGAGAGATCGAACAACAAAAGACTTCGTGA
TGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGAACCTATTGTACCTCCACCAGTTCATA
GGGGACATGTTCGAGTGGAAGAAACTAAACTCGATGAAGTTTACCATAATGTAGAAGAAGTACCTCCAGTGACACAAACATAG
Protein sequenceShow/hide protein sequence
MSNVDDMKAFLDVPDELKLDYCTAPSSHSFSPEIIFAARCLAVRKSFFACPYRRKPLLLACVAWVGSFARWCSSPCSQAVKLSPRAKELVHELPLPPAVVCVQPRVSPSC
LCPRAEEPYRVLRSSACLFLSRVPLDCERSNNKRLRDVADDPQQVLDICNNNERYMEEIHYMYDEPIVPPPVHRGHVRVEETKLDEVYHNVEEVPPVTQT