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PI0006177 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006177
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:11167065..11167580
RNA-Seq ExpressionPI0006177
SyntenyPI0006177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035024.1 hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa]1.4e-3168.57Show/hide
Query:  MSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKERNVKLATFLLQGRAENWWT
        MSSNPH+  GQN EESMF RF+QR+V +  P    V+KRF I RLKALGATTFEGTTNP N EKWLSL EK FGV++C  ER VKLAT LLQG  E+WWT
Subjt:  MSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKERNVKLATFLLQGRAENWWT

Query:  LHTVR
         HT R
Subjt:  LHTVR

KAA0039561.1 hypothetical protein E6C27_scaffold744G00310 [Cucumis melo var. makuwa]8.8e-3159.38Show/hide
Query:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN
        MA R R R  R V  GVPA  S  K QES+E+S+NP++   QN E+SMF RF QR+VD+ MPT  +VDKRF+I RL+ALGATTFE T N  + +KWL+L 
Subjt:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN

Query:  EKCFGVIECPKERNVKLATFLLQGRAEN
        EK FGV+E P+ER VKLATFLLQG  ++
Subjt:  EKCFGVIECPKERNVKLATFLLQGRAEN

KAA0053236.1 uncharacterized protein E6C27_scaffold102G00210 [Cucumis melo var. makuwa]1.6e-2458.04Show/hide
Query:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN
        MA + R R+   V TGV    +  + QESDEMS N HN+ GQNV ESMF RFT+++ D+ MPT S + KRF I RLKAL A TFEGTTNP +A+KWLSL 
Subjt:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN

Query:  EKCFGVIECPKE
        EKCFGV    K+
Subjt:  EKCFGVIECPKE

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]4.4e-3064.81Show/hide
Query:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE
        VA  V +IGS  +AQ  DEMSSNPH+   QNVEESMF RF QRV D+++P  S V+KR +I R+KALGAT FEGT  PTN +KWLSL EKCF V++CPKE
Subjt:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE

Query:  RNVKLATF
        R VKLA F
Subjt:  RNVKLATF

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]2.6e-3064.81Show/hide
Query:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE
        VA  V +IGS  +AQ  DEMSSNPH+   QNVEESMF RF +RV D+++P  S V+KR +I R+KALGATTFEGT  PTN +KWLSL EKCF V++CPKE
Subjt:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE

Query:  RNVKLATF
        R VKLA F
Subjt:  RNVKLATF

TrEMBL top hitse value%identityAlignment
A0A5A7UFQ1 Uncharacterized protein2.1e-3064.81Show/hide
Query:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE
        VA  V +IGS  +AQ  DEMSSNPH+   QNVEESMF RF QRV D+++P  S V+KR +I R+KALGAT FEGT  PTN +KWLSL EKCF V++CPKE
Subjt:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE

Query:  RNVKLATF
        R VKLA F
Subjt:  RNVKLATF

A0A5A7UG91 Uncharacterized protein7.8e-2558.04Show/hide
Query:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN
        MA + R R+   V TGV    +  + QESDEMS N HN+ GQNV ESMF RFT+++ D+ MPT S + KRF I RLKAL A TFEGTTNP +A+KWLSL 
Subjt:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN

Query:  EKCFGVIECPKE
        EKCFGV    K+
Subjt:  EKCFGVIECPKE

A0A5D3BTQ7 Uncharacterized protein6.6e-3268.57Show/hide
Query:  MSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKERNVKLATFLLQGRAENWWT
        MSSNPH+  GQN EESMF RF+QR+V +  P    V+KRF I RLKALGATTFEGTTNP N EKWLSL EK FGV++C  ER VKLAT LLQG  E+WWT
Subjt:  MSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKERNVKLATFLLQGRAENWWT

Query:  LHTVR
         HT R
Subjt:  LHTVR

A0A5D3BUF6 Uncharacterized protein4.3e-3159.38Show/hide
Query:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN
        MA R R R  R V  GVPA  S  K QES+E+S+NP++   QN E+SMF RF QR+VD+ MPT  +VDKRF+I RL+ALGATTFE T N  + +KWL+L 
Subjt:  MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLN

Query:  EKCFGVIECPKERNVKLATFLLQGRAEN
        EK FGV+E P+ER VKLATFLLQG  ++
Subjt:  EKCFGVIECPKERNVKLATFLLQGRAEN

A0A5D3DVY7 Uncharacterized protein1.2e-3064.81Show/hide
Query:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE
        VA  V +IGS  +AQ  DEMSSNPH+   QNVEESMF RF +RV D+++P  S V+KR +I R+KALGATTFEGT  PTN +KWLSL EKCF V++CPKE
Subjt:  VATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECPKE

Query:  RNVKLATF
        R VKLA F
Subjt:  RNVKLATF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACAACGAGGAAGGCCAAGGCAAAGCAGGCTAGTGGCGACAGGTGTTCCAGCTATTGGGAGCACTCGTAAAGCACAAGAATCTGACGAGATGTCCAGCAACCCGCA
TAATGTTGCTGGACAAAACGTAGAGGAAAGCATGTTTATTCGTTTTACACAAAGAGTAGTTGATTATATTATGCCCACACACTCTGTTGTGGACAAGCGATTTAGTATAT
CGAGACTGAAGGCGTTGGGAGCAACAACCTTTGAAGGAACCACTAACCCAACCAACGCGGAGAAGTGGTTGAGCTTGAATGAAAAATGTTTTGGGGTGATAGAGTGCCCT
AAAGAAAGAAATGTGAAATTAGCAACATTTTTGTTGCAAGGAAGAGCCGAAAATTGGTGGACTCTCCACACGGTGAGAGCAGGTGAACTGAGTTTTGTTCATGGGAAGCG
TTTAGGAAGGTGTTTCGGGATAAGTTCTATCTGCATTTCTTTCGCAACGGGAAGAGGAATGAATTTATGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACAACGAGGAAGGCCAAGGCAAAGCAGGCTAGTGGCGACAGGTGTTCCAGCTATTGGGAGCACTCGTAAAGCACAAGAATCTGACGAGATGTCCAGCAACCCGCA
TAATGTTGCTGGACAAAACGTAGAGGAAAGCATGTTTATTCGTTTTACACAAAGAGTAGTTGATTATATTATGCCCACACACTCTGTTGTGGACAAGCGATTTAGTATAT
CGAGACTGAAGGCGTTGGGAGCAACAACCTTTGAAGGAACCACTAACCCAACCAACGCGGAGAAGTGGTTGAGCTTGAATGAAAAATGTTTTGGGGTGATAGAGTGCCCT
AAAGAAAGAAATGTGAAATTAGCAACATTTTTGTTGCAAGGAAGAGCCGAAAATTGGTGGACTCTCCACACGGTGAGAGCAGGTGAACTGAGTTTTGTTCATGGGAAGCG
TTTAGGAAGGTGTTTCGGGATAAGTTCTATCTGCATTTCTTTCGCAACGGGAAGAGGAATGAATTTATGGGATTGA
Protein sequenceShow/hide protein sequence
MAQRGRPRQSRLVATGVPAIGSTRKAQESDEMSSNPHNVAGQNVEESMFIRFTQRVVDYIMPTHSVVDKRFSISRLKALGATTFEGTTNPTNAEKWLSLNEKCFGVIECP
KERNVKLATFLLQGRAENWWTLHTVRAGELSFVHGKRLGRCFGISSICISFATGRGMNLWD