CuGenDBv2

Gene ID	PI0006207
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	EAF domain-containing protein
Genome location	chr10:14309847..14313568
RNA-Seq Expression	PI0006207
Synteny	PI0006207
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035866.1 ELL-associated factor 2 [Cucumis melo var. makuwa]

4.7e-137

82.79

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA
        RLERLHRA                                              PRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK  VA
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA

Query:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
        SKGLTDYSSDPPN S+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
Subjt:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA

Query:  DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        +QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_004148178.1 ELL-associated factor 2 [Cucumis sativus]

7.0e-165

95.24

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS
        RLERLHRAVNQLRHLRQPGESAA  AA AT AGVAAPA  PTTASVLHSLTPPEPRLSPPVTKV+KPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS

Query:  KGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRAD
        KGLT+YSSDPPNVS+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA+
Subjt:  KGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRAD

Query:  QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        QSSSSSSSGSGSGSSSGSSSASSDSE SDEDSVTSI
Subjt:  QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_008454810.1 PREDICTED: ELL-associated factor 2 [Cucumis melo]

5.5e-162

93.53

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAA---ATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-
        RLERLHRAVNQLRHLRQPGESAA AA   AT T AGVAAPA  P++ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK 
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAA---ATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-

Query:  TVASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKGLTDYSSDPPN S+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  TVASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRA+QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_022993461.1 ELL-associated factor 1 [Cucurbita maxima]

5.4e-133

78.87

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN AFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT-VA
        RLERLHRAV QLRHLRQPGES        +AAGVAA ++  T+AS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAK+ VA
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT-VA

Query:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
        SKG  DYSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ G DIN PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Subjt:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA

Query:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
                          +QSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

8.6e-147

85.47

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN AFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAAT-ATAAGVAAPATIPTT--ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT
        RLERLHRAV QLRHLRQPGESAA AAA   T  GVAAPAT  T+  AS LHSLTPPEPRLSPPV KVAKPMHMGR SFPTMPVEVERIDIGEPGN GAK+
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAAT-ATAAGVAAPATIPTT--ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT

Query:  -VASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKGL DYSSDPPNVS SSPGLKNDDEHQDIDIDD+FGSV SDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  -VASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRA------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GR                   DQSSSSSSSGSGSGSSSGSSS SSDSEGSDEDSVTSI
Subjt:  GRA------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

3.4e-165

95.24

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +FVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS
        RLERLHRAVNQLRHLRQPGESAA  AA AT AGVAAPA  PTTASVLHSLTPPEPRLSPPVTKV+KPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS

Query:  KGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRAD
        KGLT+YSSDPPNVS+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA+
Subjt:  KGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRAD

Query:  QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        QSSSSSSSGSGSGSSSGSSSASSDSE SDEDSVTSI
Subjt:  QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

2.7e-162

93.53

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAA---ATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-
        RLERLHRAVNQLRHLRQPGESAA AA   AT T AGVAAPA  P++ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK 
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAA---ATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-

Query:  TVASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKGLTDYSSDPPN S+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  TVASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRA+QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A5A7T0X1 ELL-associated factor 2

2.3e-137

82.79

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPN +F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA
        RLERLHRA                                              PRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK  VA
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA

Query:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
        SKGLTDYSSDPPN S+SSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE G DIN PHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
Subjt:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA

Query:  DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        +QSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

2.6e-133

78.31

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN AFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA
        RLERLHRAV QLRHLRQPGES+A A A A++          T+AS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAK  VA
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAK-TVA

Query:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
        SKG  DYSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ G DIN PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Subjt:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA

Query:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
                          +QSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

2.6e-133

78.87

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN AFVGSSEDYKENDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT-VA
        RLERLHRAV QLRHLRQPGES        +AAGVAA ++  T+AS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAK+ VA
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT-VA

Query:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA
        SKG  DYSSDPPNVS  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ G DIN PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGR 
Subjt:  SKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRA

Query:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
                          +QSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  ------------------DQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

1.4e-67

51.25

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF
        M+N+  +EP TAP+ D+WY+L LG S KD+SS+KFCT RYEFKPASIDK + G + K K+NRV+VEFQN+QPGKP   F GSSEDYKE+DAVLFFDGE F
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS
        RLERLHRAV QLRH+R PGESAA +                       S  P E RLS PV + AK   + RS  P +PVEVERI+IG+P N+       
Subjt:  RLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVAS

Query:  KGLTDYSSDPPNVSISSP-GLKND--DEHQDIDIDDIFGSVSSDDGNNAEEERVEIG--IDINRPHQNDTDDEIADV-DDSGDEAEKGPNAAEALRAQVN
               ++  NV  +SP   KND  DEHQ+ID+ +IFGS + ++ +NAE+E  + G  ++      + T++EIADV DDSG E EKG NAAEALRAQVN
Subjt:  KGLTDYSSDPPNVSISSP-GLKND--DEHQDIDIDDIFGSVSSDDGNNAEEERVEIG--IDINRPHQNDTDDEIADV-DDSGDEAEKGPNAAEALRAQVN

Query:  AEGRADQSSSSS------------------SSGSGSGSSSGSSSASSDSEGS-DEDSVTSI
        AE +  Q+SSSS                  SSGSGSG  S S S+S  S GS DED V S+
Subjt:  AEGRADQSSSSS------------------SSGSGSGSSSGSSSASSDSEGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

1.8e-41

40.77

Show/hide

Query:  NNIPEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDY--KENDAVLFFDG
        +N  EEPK AP+P+RWYN++LGP+  + +   S KFCT RYEFKPASID TKPG L K+K+N+VT+EFQN+Q  KP   F G SEDY  ++ DA+LFFDG
Subjt:  NNIPEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDY--KENDAVLFFDG

Query:  ETFRLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT
        E FRLE+LHR+V +L+ LR P ESA+ +                              ++ PPV K               PV++  IDI  P       
Subjt:  ETFRLERLHRAVNQLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKT

Query:  VASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
               D+  D          +++D+E + +              +  E +   + IDIN PH  +  DDEIA VD + DE+ KG NAAEALRAQVNAE
Subjt:  VASKGLTDYSSDPPNVSISSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQND-TDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDS
         R ++S  SSSSGSG  S S  S   S   GS   S
Subjt:  GRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAACAACATCCCAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCCCTTGGTCCTTCATTCAAGGATGAATCGTCCAACAAATTTTGCAC
TTTTCGATATGAATTTAAACCGGCTTCCATTGATAAAACGAAGCCGGGGTGGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAAAACAGTCAACCTGGGA
AACCCAATTCGGCGTTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCCGTTTTGTTTTTTGATGGTGAGACATTCCGGTTGGAGCGGCTGCACAGAGCGGTCAAT
CAGCTTCGACACCTTCGACAGCCAGGCGAATCTGCTGCTGGTGCCGCTGCCACTGCCACTGCCGCAGGCGTGGCTGCACCCGCTACCATTCCCACCACTGCTTCTGTCCT
TCATTCTTTGACACCGCCGGAGCCTCGGTTATCTCCTCCAGTGACTAAAGTTGCCAAACCTATGCATATGGGTCGAAGCAGTTTTCCAACTATGCCGGTAGAGGTGGAGC
GAATAGATATTGGAGAGCCAGGAAATGCAGGTGCAAAAACTGTTGCTAGTAAAGGCCTTACTGATTACTCATCAGATCCACCAAATGTATCTATTTCCTCTCCAGGCCTG
AAGAACGATGATGAGCATCAAGATATAGATATCGATGATATTTTTGGGTCTGTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGATTGGAATTGATAT
AAATAGACCACATCAGAACGATACGGATGATGAGATTGCTGATGTGGATGATAGTGGTGATGAAGCCGAGAAGGGACCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTA
ATGCAGAAGGTAGGGCCGACCAGAGCTCAAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGTAGTGCCAGCAGTGATAGTGAAGGTAGTGATGAG
GATTCGGTTACCTCAATCTGA

mRNA sequence

Show/hide mRNA sequence

CTTAAGTTTAAACTATATATAAAAATACATTCATATTAGAAAAGCCTAATGTTTTTAATTCTGATTCTCTTCATCTCCCACGCTGTTTCTCTCTCGCTTTCCTAATCGCA
GCTCACCGCCATTCTCTCTACTGCTTCCGCCGTTGGTTTGCCAAAATCCGCCCACAATATCAGTCCAGAAGCCTCGTTTTCCCTCTTTTTTTCCGTTCTTCTGCGTTACC
CACGACTCATTGGTACCTTCAATCCACTTACCCTTCGATCTCTCACTTCTCAACCAATTTGGAATACTCTACAGGATGGGAATTCAGTTCTCTTCGTGAATTTTCATGGT
TTCAGCTTGAAAAGATTTGTTAGTTCCGGATTGTCCATTCAAGGTTTCTAGGCGACTTCGAATCCGAAATTTTCTTGATAATTATTTGAATCCGTAATGGCGAACAACAT
CCCAGAAGAGCCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCCCTTGGTCCTTCATTCAAGGATGAATCGTCCAACAAATTTTGCACTTTTCGATATGAAT
TTAAACCGGCTTCCATTGATAAAACGAAGCCGGGGTGGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAAAACAGTCAACCTGGGAAACCCAATTCGGCG
TTTGTTGGTAGTAGTGAGGATTATAAGGAGAATGATGCCGTTTTGTTTTTTGATGGTGAGACATTCCGGTTGGAGCGGCTGCACAGAGCGGTCAATCAGCTTCGACACCT
TCGACAGCCAGGCGAATCTGCTGCTGGTGCCGCTGCCACTGCCACTGCCGCAGGCGTGGCTGCACCCGCTACCATTCCCACCACTGCTTCTGTCCTTCATTCTTTGACAC
CGCCGGAGCCTCGGTTATCTCCTCCAGTGACTAAAGTTGCCAAACCTATGCATATGGGTCGAAGCAGTTTTCCAACTATGCCGGTAGAGGTGGAGCGAATAGATATTGGA
GAGCCAGGAAATGCAGGTGCAAAAACTGTTGCTAGTAAAGGCCTTACTGATTACTCATCAGATCCACCAAATGTATCTATTTCCTCTCCAGGCCTGAAGAACGATGATGA
GCATCAAGATATAGATATCGATGATATTTTTGGGTCTGTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGATTGGAATTGATATAAATAGACCACATC
AGAACGATACGGATGATGAGATTGCTGATGTGGATGATAGTGGTGATGAAGCCGAGAAGGGACCTAATGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCAGAAGGTAGG
GCCGACCAGAGCTCAAGTTCTAGTAGTAGCGGATCGGGCAGTGGCAGCAGCAGTGGAAGTAGTAGTGCCAGCAGTGATAGTGAAGGTAGTGATGAGGATTCGGTTACCTC
AATCTGATGGAGCTGATGAAATCTTGAGCTTTGAGAAGCCATCTTCTGATGTATGCAAAAACTGTTCTCACCCTCGATTCTTGTAGATCATACTTCATTTTTTTCTCCTC
TTTTATAGTATAGATGGGAATCAAACCTCCAACATCACAAGA

Protein sequence

Show/hide protein sequence

MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNSAFVGSSEDYKENDAVLFFDGETFRLERLHRAVN
QLRHLRQPGESAAGAAATATAAGVAAPATIPTTASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKTVASKGLTDYSSDPPNVSISSPGL
KNDDEHQDIDIDDIFGSVSSDDGNNAEEERVEIGIDINRPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRADQSSSSSSSGSGSGSSSGSSSASSDSEGSDE
DSVTSI

PI0006207 (gene) of Melon (PI 482460) v1 genome