CuGenDBv2

Gene ID	PI0006230
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	rho GDP-dissociation inhibitor 1-like
Genome location	chr04:21112433..21115463
RNA-Seq Expression	PI0006230
Synteny	PI0006230
Gene Ontology terms	GO:0007266 - Rho protein signal transduction (biological process) GO:0050790 - regulation of catalytic activity (biological process) GO:0005829 - cytosol (cellular component) GO:0016020 - membrane (cellular component) GO:0005094 - Rho GDP-dissociation inhibitor activity (molecular function)
InterPro domains	IPR000406 - Rho protein GDP-dissociation inhibitor IPR014756 - Immunoglobulin E-set IPR024792 - Rho GDP-dissociation inhibitor domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008447394.1 PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X1 [Cucumis melo]

2.7e-26

96.83

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VDRTQGMLGTFAPQREPYVETLEEE TPSGVLARGIYSA LKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

XP_008447395.1 PREDICTED: rho GDP-dissociation inhibitor 1-like isoform X2 [Cucumis melo]

3.5e-26

95.24

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        +DRTQGMLGTFAPQREPYVETLEEE TPSGVLARGIYSA LKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

XP_011651610.1 rho GDP-dissociation inhibitor 1 [Cucumis sativus]

5.5e-27

96.83

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VD+TQGMLGTFAPQREPYVETLEEETTPSG+LARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

XP_022996428.1 rho GDP-dissociation inhibitor 1-like [Cucurbita maxima]

2.3e-25

96.77

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        VDRTQGMLGTFAPQRE YVETLEEETTPSGVLARG YSAKLKFEDDDKRCYMELPYSFEIKK
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

XP_038887564.1 rho GDP-dissociation inhibitor 1-like [Benincasa hispida]

3.2e-27

98.41

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VDRTQGMLGTFAPQR+PYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LC51 Uncharacterized protein

2.6e-27

96.83

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VD+TQGMLGTFAPQREPYVETLEEETTPSG+LARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

A0A1S3BGS7 rho GDP-dissociation inhibitor 1-like isoform X2

1.7e-26

95.24

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        +DRTQGMLGTFAPQREPYVETLEEE TPSGVLARGIYSA LKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

A0A1S3BI82 rho GDP-dissociation inhibitor 1-like isoform X1

1.3e-26

96.83

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VDRTQGMLGTFAPQREPYVETLEEE TPSGVLARGIYSA LKFEDDDKRCYMELPYSFEIKKS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

A0A6J1ESV0 rho GDP-dissociation inhibitor 1-like

1.1e-25

96.77

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        VDRTQGMLGTFAPQRE YVETLEEETTPSGVLARG YSAKLKFEDDDKRCYMELPYSFEIKK
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

A0A6J1KAQ9 rho GDP-dissociation inhibitor 1-like

1.1e-25

96.77

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        VDRTQGMLGTFAPQRE YVETLEEETTPSGVLARG YSAKLKFEDDDKRCYMELPYSFEIKK
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

SwissProt top hits

e value

%identity

Alignment

O14224 Rho GDP-dissociation inhibitor

4.1e-09

44.44

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Query:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        VD+T  M+G++ P   PY  T E +  P+G+LARG Y A  KF DDDK  + E  ++F++ KS
Subjt:  VDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

P52565 Rho GDP-dissociation inhibitor 1

2.9e-07

39.68

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        ++D+T  M+G++ P+ E Y      E  P G+LARG YS K +F DDDK  ++   ++  IKK
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

Q4R4J0 Rho GDP-dissociation inhibitor 1

2.9e-07

39.68

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        ++D+T  M+G++ P+ E Y      E  P G+LARG YS K +F DDDK  ++   ++  IKK
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

Q99PT1 Rho GDP-dissociation inhibitor 1

6.5e-07

38.1

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        ++D+T  M+G++ P+ E Y      E  P G+LARG Y+ K +F DDDK  ++   ++  IKK
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

Q9SFC6 Rho GDP-dissociation inhibitor 1

1.8e-17

61.9

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        +VDR + MLGTF+PQ EPY   + EETTPSG+ ARG YSA+ KF DDD +CY+E+ YSF+I+K
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

Arabidopsis top hits

e value

%identity

Alignment

AT1G12070.1 Immunoglobulin E-set superfamily protein

1.8e-15

59.65

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Query:  MLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        MLGTF+PQ EPY   + EET PSG+L RG YS K KF DDD +CY+E  Y+F+I+K+
Subjt:  MLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

AT1G62450.1 Immunoglobulin E-set superfamily protein

1.4e-17

57.81

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS
        +VD T+ MLGTF+PQ E Y   + EE TPSG+ ARG YSA+ KF DDD +CY+E+ Y+F+I+KS
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKS

AT3G07880.1 Immunoglobulin E-set superfamily protein

1.3e-18

61.9

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Query:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK
        +VDR + MLGTF+PQ EPY   + EETTPSG+ ARG YSA+ KF DDD +CY+E+ YSF+I+K
Subjt:  RVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKK

Sequences

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CDS sequence

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ATGGAAAAATTGAAGAGTCGTGTCGATCGAACTCAAGGAATGTTAGGTACTTTTGCTCCTCAACGTGAACCATATGTCGAAACCTTGGAGGAGGAAACCACTCCTTCTGG
TGTACTTGCAAGGGGTATTTACTCTGCAAAGCTTAAGTTCGAAGATGATGACAAACGGTGTTACATGGAACTCCCCTATTCCTTTGAGATAAAAAAAAGCTGTTAG

mRNA sequence

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Protein sequence

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MEKLKSRVDRTQGMLGTFAPQREPYVETLEEETTPSGVLARGIYSAKLKFEDDDKRCYMELPYSFEIKKSC

PI0006230 (gene) of Melon (PI 482460) v1 genome