; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006235 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006235
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionIntegrase core domain containing protein
Genome locationchr08:4984961..4985872
RNA-Seq ExpressionPI0006235
SyntenyPI0006235
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]3.9e-1673.77Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF
        P +ES    DQLLLGWLYNSMTP+VATQ+MGYE++ DLW  IQ+LFGVQS+AEEDYLRQ F
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]2.0e-1268.42Show/hide
Query:  DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        D LLLGW+YNSMTP+VA QLMG+  + DLW  IQ LFGVQ RAEED+LR TF T  K
Subjt:  DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

XP_038904321.1 uncharacterized protein LOC120090675 [Benincasa hispida]1.2e-1471.93Show/hide
Query:  DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        DQLLLGWLYNSMTPK+A Q+MG+E + DLW  IQ+LFG+QSRAEEDYLR  F T  K
Subjt:  DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]8.1e-1466.67Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        P +ES    DQLLLGWLYNSMTP+VA Q+MG E + DLWT I +LFGVQSR EEDYLR  F T  K
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]8.1e-1466.67Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        P +ES    DQLLLGWLYNSMTP+VA Q+MG E + DLWT I +LFGVQSR EEDYLR  F T  K
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911161.6e-1263.79Show/hide
Query:  SDQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        +D LLLGWLYNSMTP+V  QLMG+ ++ DLW   Q LFG+QSRA+ED+L QTF T  K
Subjt:  SDQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

A0A5A7UCB8 Integrase core domain containing protein3.7e-1263.93Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF
        PAFE+    DQLLL W+YNSMTPK+ TQLM  EHS DLW  IQ+LF +QSR +E+Y R TF
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF

A0A5A7VPY0 Uncharacterized protein1.6e-1263.79Show/hide
Query:  SDQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK
        +D LLLGWLYNSMTP+V  QLMG+ ++ DLW   Q LFG+QSRA+ED+L QTF T  K
Subjt:  SDQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTFITNTK

A0A5D3D6E7 Integrase core domain containing protein3.7e-1263.93Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF
        PAFE+    DQLLL W+YNSMTPK+ TQLM  EHS DLW  IQ+LF +QSR +E+Y R TF
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF

A0A6J1D5J0 uncharacterized protein LOC1110175011.9e-1673.77Show/hide
Query:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF
        P +ES    DQLLLGWLYNSMTP+VATQ+MGYE++ DLW  IQ+LFGVQS+AEEDYLRQ F
Subjt:  PAFES----DQLLLGWLYNSMTPKVATQLMGYEHSFDLWTGIQKLFGVQSRAEEDYLRQTF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGGTTTGCAGATCCCAAGAAAAAGGACAGAGTATTAAGGAAAAAACCAAATACAATCAGCACAAGGAAAAGTCAATAATCCAGTCAGCAGTACAATCAACACA
ATGCATAAATACAATTCACCACGGTCAGCATTTGGATGAAAACAATCGAGAATCTTCCATTGAGTTAAATGGCAAACGTCGTCTCACCCAATTCGAACCCAAGCTTCAGT
ACACCATCCCTCAACCAGCTTTTGAATCAGATCAACTGCTTCTAGGATGGCTTTACAACTCAATGACACCAAAAGTCGCTACACAACTTATGGGTTATGAGCACTCGTTC
GATCTGTGGACGGGAATACAAAAGTTATTCGGTGTTCAATCCAGAGCTGAGGAAGATTATCTCCGCCAAACTTTCATCACAAACACGAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGGTTTGCAGATCCCAAGAAAAAGGACAGAGTATTAAGGAAAAAACCAAATACAATCAGCACAAGGAAAAGTCAATAATCCAGTCAGCAGTACAATCAACACA
ATGCATAAATACAATTCACCACGGTCAGCATTTGGATGAAAACAATCGAGAATCTTCCATTGAGTTAAATGGCAAACGTCGTCTCACCCAATTCGAACCCAAGCTTCAGT
ACACCATCCCTCAACCAGCTTTTGAATCAGATCAACTGCTTCTAGGATGGCTTTACAACTCAATGACACCAAAAGTCGCTACACAACTTATGGGTTATGAGCACTCGTTC
GATCTGTGGACGGGAATACAAAAGTTATTCGGTGTTCAATCCAGAGCTGAGGAAGATTATCTCCGCCAAACTTTCATCACAAACACGAAAAGGTAA
Protein sequenceShow/hide protein sequence
MAGVCRSQEKGQSIKEKTKYNQHKEKSIIQSAVQSTQCINTIHHGQHLDENNRESSIELNGKRRLTQFEPKLQYTIPQPAFESDQLLLGWLYNSMTPKVATQLMGYEHSF
DLWTGIQKLFGVQSRAEEDYLRQTFITNTKR