; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006245 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006245
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr01:14650711..14652594
RNA-Seq ExpressionPI0006245
SyntenyPI0006245
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046851.1 uncharacterized protein E6C27_scaffold19358G00020 [Cucumis melo var. makuwa]5.8e-8843.96Show/hide
Query:  GVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC----------------------------
        GVVM DFNAIR HSE  GG+P+ G+MEEFD AIR+A+LVEPSV GNWFTWTSKV+GS  LRRLD +L N++                             
Subjt:  GVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC----------------------------

Query:  ----------------------------------------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEA
                                                                  HI+ LSEEV   KEAMD AQREVER+P S   SR A LATE 
Subjt:  ----------------------------------------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEA

Query:  FWSAIHLEEASLHQKSRLSGWSFLIKIPPFFIVRFVPVSVVVGGVFSSV-TEGIR---HD----------------------------------------
        FW+A+ LEEASL QKS++  W  L      F  R V   +    + S V ++G R   HD                                        
Subjt:  FWSAIHLEEASLHQKSRLSGWSFLIKIPPFFIVRFVPVSVVVGGVFSSV-TEGIR---HD----------------------------------------

Query:  -----------EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------
                   E+RRVLF MDS KAP PDGFSVGF+K A +VVGEDFC+AV+HFF+TCYLP GVNATAITLIPK  G E +                   
Subjt:  -----------EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------

Query:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPLHF
            LR+WLPSFIS NQS  + GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF LLI+IGTPL F
Subjt:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPLHF

KAA0057642.1 reverse transcriptase [Cucumis melo var. makuwa]3.5e-9341.53Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV GNWFTWTSKV+GS  +RRLD +L N+                               
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  --------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSF
                                  HIR LSEEVR  KEAMD AQREVER+P S   SR A LATE FW+A+ LE+    +          SR+S    
Subjt:  --------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSF

Query:  LIKIPPFFI--------VRFVPVSVVVGGVF---------SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLP
        + ++   +         + +  ++ ++  +           ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP
Subjt:  LIKIPPFFI--------VRFVPVSVVVGGVF---------SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLP

Query:  TGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDS
         GVNATAITLIPK  G E +                       LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDS
Subjt:  TGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDS

Query:  VNWDFLFSLLISIGTPLHF---------------------------------------------------------------------FGELLGLAANMG
        VNWDFLF L ISI TPL F                                                                     FGEL GL AN  
Subjt:  VNWDFLFSLLISIGTPLHF---------------------------------------------------------------------FGELLGLAANMG

Query:  KSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL
        KSS+F+AGV++E AS L    C G+   +LP  +L L
Subjt:  KSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]7.4e-8345.64Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIR H E  GG+P+ G+ME+FD A R+A+LVEPSV GNWFTWTSKV GS  LRRLD IL N++                              
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  ---------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQKSRLSGWSFLIKIPPFF
                                   HI+ L+EEV   KE MDRAQREVE +P S   SR  GLATEAFW+A+ LEEASL QKSR+  W  L      F
Subjt:  ---------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQKSRLSGWSFLIKIPPFF

Query:  IVRFVPVSVVVGGVFSSV-TEGIR---HD---------------------------------------------------EIRRVLFVMDSSKAPSPDGF
          R V   +    + S V  +G R   HD                                                   E+RRVLF MDS KAP PDGF
Subjt:  IVRFVPVSVVVGGVFSSV-TEGIR---HD---------------------------------------------------EIRRVLFVMDSSKAPSPDGF

Query:  SVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAIL
        SVGFFK A +VV EDFCD V+HFF+TCYLP GVNAT ITLIPKR G E M                       LRVWLPSFI  NQS  + GRSI D IL
Subjt:  SVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAIL

Query:  LCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFL
        LCQE+V GYH  SG  +C +KVDLQKAYDSVNWDFL
Subjt:  LCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFL

TYK19523.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-8241.11Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV  NWFTWTSKV+GS  +RRLD +L N+                               
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  ----------------------------------HIRGLSEEVRSTKEAMDRAQREVE-RDPGSVERSR---LAGLATEAFWSAIHLEEASLHQKSRLSG
                                          HIR LSEEVR  KEAMD AQRE++ R     E S     AG+++    + + +   S    S+  G
Subjt:  ----------------------------------HIRGLSEEVRSTKEAMDRAQREVE-RDPGSVERSR---LAGLATEAFWSAIHLEEASLHQKSRLSG

Query:  WSFLIKIPPFFIVRFVPVSVVVGGVFSSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKR
        +  L  I    IV+F            ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP GVNATAITLIPK 
Subjt:  WSFLIKIPPFFIVRFVPVSVVVGGVFSSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKR

Query:  CGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIG
         G E +                       LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF L ISI 
Subjt:  CGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIG

Query:  TPLHF---------------------------------------------------------------------FGELLGLAANMGKSSMFVAGVDSEAA
        TPL F                                                                     FGEL GL AN  KSS+F+AGV++E A
Subjt:  TPLHF---------------------------------------------------------------------FGELLGLAANMGKSSMFVAGVDSEAA

Query:  SWLIVWGCAGYSTCSLPRYFLTL
        S L    C G+   +LP  +L L
Subjt:  SWLIVWGCAGYSTCSLPRYFLTL

XP_008452126.1 PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo]3.0e-10047.33Show/hide
Query:  MVDSGVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------HIRGLSEEVRSTK
        +V+  VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV  NWFTWTSKV+GS  +RRLD +L N+             HIR LSEEVR  K
Subjt:  MVDSGVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------HIRGLSEEVRSTK

Query:  EAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSFLIKIPPFFI--------VRFVPVSVVVGGVF--------
        EAMD AQREVER+P S   SR A LATE FW+A+ LE+    +          SR+S    + ++   +         + +  ++ ++  +         
Subjt:  EAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSFLIKIPPFFI--------VRFVPVSVVVGGVF--------

Query:  -SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------
          ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP GVNATAITLIPK  G E +                   
Subjt:  -SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------

Query:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPL----------------------
            LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF L ISI TPL                      
Subjt:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPL----------------------

Query:  ------------------HFFGELLGLAANMGKSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL
                            FGEL GL AN  KSS+F+AGV++E AS L    C G+   +LP  +L L
Subjt:  ------------------HFFGELLGLAANMGKSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL

TrEMBL top hitse value%identityAlignment
A0A1S3BSI8 uncharacterized protein LOC1034932251.4e-10047.33Show/hide
Query:  MVDSGVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------HIRGLSEEVRSTK
        +V+  VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV  NWFTWTSKV+GS  +RRLD +L N+             HIR LSEEVR  K
Subjt:  MVDSGVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------HIRGLSEEVRSTK

Query:  EAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSFLIKIPPFFI--------VRFVPVSVVVGGVF--------
        EAMD AQREVER+P S   SR A LATE FW+A+ LE+    +          SR+S    + ++   +         + +  ++ ++  +         
Subjt:  EAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSFLIKIPPFFI--------VRFVPVSVVVGGVF--------

Query:  -SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------
          ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP GVNATAITLIPK  G E +                   
Subjt:  -SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------

Query:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPL----------------------
            LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF L ISI TPL                      
Subjt:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPL----------------------

Query:  ------------------HFFGELLGLAANMGKSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL
                            FGEL GL AN  KSS+F+AGV++E AS L    C G+   +LP  +L L
Subjt:  ------------------HFFGELLGLAANMGKSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL

A0A5A7TZS0 Reverse transcriptase domain-containing protein2.8e-8843.96Show/hide
Query:  GVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC----------------------------
        GVVM DFNAIR HSE  GG+P+ G+MEEFD AIR+A+LVEPSV GNWFTWTSKV+GS  LRRLD +L N++                             
Subjt:  GVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC----------------------------

Query:  ----------------------------------------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEA
                                                                  HI+ LSEEV   KEAMD AQREVER+P S   SR A LATE 
Subjt:  ----------------------------------------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEA

Query:  FWSAIHLEEASLHQKSRLSGWSFLIKIPPFFIVRFVPVSVVVGGVFSSV-TEGIR---HD----------------------------------------
        FW+A+ LEEASL QKS++  W  L      F  R V   +    + S V ++G R   HD                                        
Subjt:  FWSAIHLEEASLHQKSRLSGWSFLIKIPPFFIVRFVPVSVVVGGVFSSV-TEGIR---HD----------------------------------------

Query:  -----------EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------
                   E+RRVLF MDS KAP PDGFSVGF+K A +VVGEDFC+AV+HFF+TCYLP GVNATAITLIPK  G E +                   
Subjt:  -----------EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-------------------

Query:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPLHF
            LR+WLPSFIS NQS  + GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF LLI+IGTPL F
Subjt:  ----LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPLHF

A0A5A7UP65 Reverse transcriptase1.7e-9341.53Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV GNWFTWTSKV+GS  +RRLD +L N+                               
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  --------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSF
                                  HIR LSEEVR  KEAMD AQREVER+P S   SR A LATE FW+A+ LE+    +          SR+S    
Subjt:  --------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQK---------SRLSGWSF

Query:  LIKIPPFFI--------VRFVPVSVVVGGVF---------SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLP
        + ++   +         + +  ++ ++  +           ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP
Subjt:  LIKIPPFFI--------VRFVPVSVVVGGVF---------SSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLP

Query:  TGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDS
         GVNATAITLIPK  G E +                       LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDS
Subjt:  TGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDS

Query:  VNWDFLFSLLISIGTPLHF---------------------------------------------------------------------FGELLGLAANMG
        VNWDFLF L ISI TPL F                                                                     FGEL GL AN  
Subjt:  VNWDFLFSLLISIGTPLHF---------------------------------------------------------------------FGELLGLAANMG

Query:  KSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL
        KSS+F+AGV++E AS L    C G+   +LP  +L L
Subjt:  KSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein3.6e-8345.64Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIR H E  GG+P+ G+ME+FD A R+A+LVEPSV GNWFTWTSKV GS  LRRLD IL N++                              
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  ---------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQKSRLSGWSFLIKIPPFF
                                   HI+ L+EEV   KE MDRAQREVE +P S   SR  GLATEAFW+A+ LEEASL QKSR+  W  L      F
Subjt:  ---------------------------HIRGLSEEVRSTKEAMDRAQREVERDPGSVERSRLAGLATEAFWSAIHLEEASLHQKSRLSGWSFLIKIPPFF

Query:  IVRFVPVSVVVGGVFSSV-TEGIR---HD---------------------------------------------------EIRRVLFVMDSSKAPSPDGF
          R V   +    + S V  +G R   HD                                                   E+RRVLF MDS KAP PDGF
Subjt:  IVRFVPVSVVVGGVFSSV-TEGIR---HD---------------------------------------------------EIRRVLFVMDSSKAPSPDGF

Query:  SVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAIL
        SVGFFK A +VV EDFCD V+HFF+TCYLP GVNAT ITLIPKR G E M                       LRVWLPSFI  NQS  + GRSI D IL
Subjt:  SVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAIL

Query:  LCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFL
        LCQE+V GYH  SG  +C +KVDLQKAYDSVNWDFL
Subjt:  LCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFL

A0A5D3D7P6 Reverse transcriptase6.1e-8341.11Show/hide
Query:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------
        VVM DFNAIRGHSE CGG+P+ G+ME+FD AIR+A+LVEPSV  NWFTWTSKV+GS  +RRLD +L N+                               
Subjt:  VVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQC-----------------------------

Query:  ----------------------------------HIRGLSEEVRSTKEAMDRAQREVE-RDPGSVERSR---LAGLATEAFWSAIHLEEASLHQKSRLSG
                                          HIR LSEEVR  KEAMD AQRE++ R     E S     AG+++    + + +   S    S+  G
Subjt:  ----------------------------------HIRGLSEEVRSTKEAMDRAQREVE-RDPGSVERSR---LAGLATEAFWSAIHLEEASLHQKSRLSG

Query:  WSFLIKIPPFFIVRFVPVSVVVGGVFSSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKR
        +  L  I    IV+F            ++   I  +E+RRVLF MDS KAP PDGFSVGFFK A +V+GEDFCDAV+HFF+T YLP GVNATAITLIPK 
Subjt:  WSFLIKIPPFFIVRFVPVSVVVGGVFSSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKR

Query:  CGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIG
         G E +                       LRVWLPSFIS NQS  ++GRSI + ILLCQE+VGGYH  SG  +C +KVDLQKAYDSVNWDFLF L ISI 
Subjt:  CGVEHM-----------------------LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIG

Query:  TPLHF---------------------------------------------------------------------FGELLGLAANMGKSSMFVAGVDSEAA
        TPL F                                                                     FGEL GL AN  KSS+F+AGV++E A
Subjt:  TPLHF---------------------------------------------------------------------FGELLGLAANMGKSSMFVAGVDSEAA

Query:  SWLIVWGCAGYSTCSLPRYFLTL
        S L    C G+   +LP  +L L
Subjt:  SWLIVWGCAGYSTCSLPRYFLTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein7.5e-0945.71Show/hide
Query:  EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM
        EI   +F M  +KAP PD F+  FF ++  VV +    AV  FF T +L    NATAITLIPK  GV+ +
Subjt:  EIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDTCYLPTGVNATAITLIPKRCGVEHM

AT4G20520.1 RNA binding;RNA-directed DNA polymerases1.0e-0536.49Show/hide
Query:  LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSG-PSQCAIKVDLQKAYDSVNWDFLFSLLISIGTP
        L+  + + I   Q+  + GR  TD I+  QE V       G      +K+DL+KAYD + WD+L   LIS G P
Subjt:  LRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSG-PSQCAIKVDLQKAYDSVNWDFLFSLLISIGTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGATTCCGGGGTTGTCATGTGGGACTTTAATGCTATTCGTGGACACTCTGAAGTTTGTGGTGGGAATCCGGTTCCTGGTGATATGGAGGAGTTTGATCCTGCTAT
TCGAGAGGCTAACTTGGTGGAGCCGTCTGTTCCGGGAAATTGGTTCACTTGGACGAGTAAGGTGCGCGGTTCAAGTTGGTTGCGTCGGCTTGATCATATTTTGGCTAATG
AGCAGTGCCATATCAGAGGCCTTAGTGAGGAGGTGCGCTCTACTAAGGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGAGGGATCCTGGGTCTGTTGAAAGGAGTCGT
CTTGCTGGCCTTGCGACTGAGGCTTTTTGGTCCGCTATCCATCTGGAAGAAGCTTCTCTCCATCAGAAATCACGGTTAAGTGGTTGGAGCTTCTTGATCAAAATTCCACC
TTTTTTCATTGTTCGCTTCGTTCCCGTATCTGTCGTGGTCGGAGGAGTGTTTTCAAGCGTTACAGAAGGAATTAGGCATGATGAGATTAGGAGGGTTTTATTTGTTATGG
ATAGTAGTAAAGCTCCTAGTCCGGATGGTTTTTCAGTGGGGTTCTTCAAGGATGCTAGGAATGTGGTTGGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGACACT
TGTTATCTACCAACTGGGGTTAATGCTACTGCGATCACCCTCATTCCCAAACGTTGTGGGGTCGAGCATATGCTTCGTGTGTGGCTTCCTTCTTTTATCAGTGGTAATCA
GTCAGTCGTTGTTGTTGGGAGGAGTATTACTGATGCTATCCTGCTTTGTCAGGAGATGGTTGGGGGTTATCATGGTACTTCTGGTCCGTCTCAGTGTGCGATAAAGGTGG
ACCTTCAGAAGGCTTACGATTCGGTGAATTGGGATTTTCTGTTCAGCTTGTTGATTTCTATTGGCACTCCCTTGCATTTTTTTGGGGAGTTATTGGGGTTGGCTGCTAAT
ATGGGGAAGAGCTCTATGTTTGTGGCAGGGGTTGACAGTGAGGCTGCTAGTTGGCTGATAGTATGGGGTTGCGCTGGGTACTCTACATGTTCGTTACCTAGGTATTTCCT
TACTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGATTCCGGGGTTGTCATGTGGGACTTTAATGCTATTCGTGGACACTCTGAAGTTTGTGGTGGGAATCCGGTTCCTGGTGATATGGAGGAGTTTGATCCTGCTAT
TCGAGAGGCTAACTTGGTGGAGCCGTCTGTTCCGGGAAATTGGTTCACTTGGACGAGTAAGGTGCGCGGTTCAAGTTGGTTGCGTCGGCTTGATCATATTTTGGCTAATG
AGCAGTGCCATATCAGAGGCCTTAGTGAGGAGGTGCGCTCTACTAAGGAGGCTATGGATAGGGCCCAGCGTGAGGTTGAGAGGGATCCTGGGTCTGTTGAAAGGAGTCGT
CTTGCTGGCCTTGCGACTGAGGCTTTTTGGTCCGCTATCCATCTGGAAGAAGCTTCTCTCCATCAGAAATCACGGTTAAGTGGTTGGAGCTTCTTGATCAAAATTCCACC
TTTTTTCATTGTTCGCTTCGTTCCCGTATCTGTCGTGGTCGGAGGAGTGTTTTCAAGCGTTACAGAAGGAATTAGGCATGATGAGATTAGGAGGGTTTTATTTGTTATGG
ATAGTAGTAAAGCTCCTAGTCCGGATGGTTTTTCAGTGGGGTTCTTCAAGGATGCTAGGAATGTGGTTGGTGAGGATTTTTGTGATGCTGTGATGCATTTCTTTGACACT
TGTTATCTACCAACTGGGGTTAATGCTACTGCGATCACCCTCATTCCCAAACGTTGTGGGGTCGAGCATATGCTTCGTGTGTGGCTTCCTTCTTTTATCAGTGGTAATCA
GTCAGTCGTTGTTGTTGGGAGGAGTATTACTGATGCTATCCTGCTTTGTCAGGAGATGGTTGGGGGTTATCATGGTACTTCTGGTCCGTCTCAGTGTGCGATAAAGGTGG
ACCTTCAGAAGGCTTACGATTCGGTGAATTGGGATTTTCTGTTCAGCTTGTTGATTTCTATTGGCACTCCCTTGCATTTTTTTGGGGAGTTATTGGGGTTGGCTGCTAAT
ATGGGGAAGAGCTCTATGTTTGTGGCAGGGGTTGACAGTGAGGCTGCTAGTTGGCTGATAGTATGGGGTTGCGCTGGGTACTCTACATGTTCGTTACCTAGGTATTTCCT
TACTCTCTGA
Protein sequenceShow/hide protein sequence
MVDSGVVMWDFNAIRGHSEVCGGNPVPGDMEEFDPAIREANLVEPSVPGNWFTWTSKVRGSSWLRRLDHILANEQCHIRGLSEEVRSTKEAMDRAQREVERDPGSVERSR
LAGLATEAFWSAIHLEEASLHQKSRLSGWSFLIKIPPFFIVRFVPVSVVVGGVFSSVTEGIRHDEIRRVLFVMDSSKAPSPDGFSVGFFKDARNVVGEDFCDAVMHFFDT
CYLPTGVNATAITLIPKRCGVEHMLRVWLPSFISGNQSVVVVGRSITDAILLCQEMVGGYHGTSGPSQCAIKVDLQKAYDSVNWDFLFSLLISIGTPLHFFGELLGLAAN
MGKSSMFVAGVDSEAASWLIVWGCAGYSTCSLPRYFLTL