CuGenDBv2

Gene ID	PI0006254
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	tRNA_edit domain-containing protein
Genome location	chr06:28557705..28563248
RNA-Seq Expression	PI0006254
Synteny	PI0006254
Gene Ontology terms	GO:0106074 - aminoacyl-tRNA metabolism involved in translational fidelity (biological process) GO:0002161 - aminoacyl-tRNA editing activity (molecular function) GO:0004812 - aminoacyl-tRNA ligase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041095.1 YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 [Cucumis melo var. makuwa]

8.2e-68

91.16

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

TYK12014.1 YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 [Cucumis melo var. makuwa]

8.2e-68

91.16

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

XP_008448863.1 PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo]

8.2e-68

91.16

Show/hide

Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

XP_022951583.1 uncharacterized protein LOC111454353 [Cucurbita moschata]

4.2e-56

76.87

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MGTE+ AMAE+NSMEAL KLE+RQTLI++RIS LEL YLPNL S PS + S+GAD DTVARLS ILRTNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQA SHVVDCS+RNNSKYY+VVVQY+A    + +++
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

XP_038903466.1 uncharacterized protein LOC120090048 [Benincasa hispida]

2.1e-63

86.39

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MGTESEAMAEQN MEAL KLEHRQTLILHRIS LEL YLPNL S  SSVPSDG D DTVARLSAILRTN+VNDFSFKRVPSDYYDWPLEARRDVLDAAS+
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BLB4 uncharacterized protein LOC103490895

4.0e-68

91.16

Show/hide

Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

A0A5A7TI57 YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2

4.0e-68

91.16

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

A0A5D3CLG6 YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2

4.0e-68

91.16

Show/hide

Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MG+ESEAMAEQNSMEAL KLEHRQTLILHRISNLELKYLPNL SPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDW LEARRDVLDAASI
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQAPSHVVDCSDRNNSKYYIVVVQYTA    + +K+
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

A0A6J1GI39 uncharacterized protein LOC111454353

2.0e-56

76.87

Show/hide

Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MGTE+ AMAE+NSMEAL KLE+RQTLI++RIS LEL YLPNL S PS + S+GAD DTVARLS ILRTNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQA SHVVDCS+RNNSKYY+VVVQY+A    + +++
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

A0A6J1KXM4 uncharacterized protein LOC111498483

1.5e-54

74.83

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Query:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI
        MGTE+ A+AE+NSMEAL KLE+RQTLI++RIS LEL YLPNL S PS + SD AD DTV+RLS ILRTNAVNDFSF RVPSDYYDW LEARRDVL+AAS+
Subjt:  MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASI

Query:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA
        DHLCKSIVL+NTQA SHVVDCS+RNNSKYY+VVVQY+A    + +++
Subjt:  DHLCKSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain

2.5e-38

58.45

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Query:  MAEQNSME-ALVKLEHRQTLILHRISNLELKYLPNLGS--PPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLC
        M +   ME A  +LE  Q  ILH+IS LE  +LP   S  P  S+P D  +++TV RLS IL++  VNDF FKRV +DYYDWPLE+RRDVL A+S+DHLC
Subjt:  MAEQNSME-ALVKLEHRQTLILHRISNLELKYLPNLGS--PPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLC

Query:  KSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLK
        KSIVL+NTQA S+++DCSD NNSKYY+VVVQYTA    + +K
Subjt:  KSIVLINTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAACTGAGAGTGAAGCAATGGCAGAGCAAAACTCCATGGAAGCACTAGTCAAGCTCGAACACCGGCAGACCCTAATCCTCCATCGAATTTCAAACCTCGAGCTCAA
ATACCTTCCAAATCTTGGCTCTCCTCCTTCCTCTGTTCCCTCTGATGGCGCTGATGACGACACCGTAGCTCGACTCTCTGCCATTCTCAGAACCAACGCTGTCAACGACT
TTTCCTTCAAAAGGGTGCCTTCTGATTACTACGATTGGCCTCTCGAAGCGCGACGGGACGTTCTTGATGCTGCTTCTATCGACCATCTCTGCAAGAGCATCGTTCTGATA
AATACTCAAGCACCATCCCATGTTGTTGATTGCAGTGACCGCAACAATTCAAAATACTATATTGTTGTCGTTCAGTATACTGCCAATTTAATGCTGAAACTGTTAAAAGC
TTCCTGTATTCACTCAATGATGGCAAGATAG

mRNA sequence

Show/hide mRNA sequence

CAAAATTGCAATTAAGAAAAATAAAAATCACATTCAGCTGAATTAGCAAATGGGAACTGAGAGTGAAGCAATGGCAGAGCAAAACTCCATGGAAGCACTAGTCAAGCTCG
AACACCGGCAGACCCTAATCCTCCATCGAATTTCAAACCTCGAGCTCAAATACCTTCCAAATCTTGGCTCTCCTCCTTCCTCTGTTCCCTCTGATGGCGCTGATGACGAC
ACCGTAGCTCGACTCTCTGCCATTCTCAGAACCAACGCTGTCAACGACTTTTCCTTCAAAAGGGTGCCTTCTGATTACTACGATTGGCCTCTCGAAGCGCGACGGGACGT
TCTTGATGCTGCTTCTATCGACCATCTCTGCAAGAGCATCGTTCTGATAAATACTCAAGCACCATCCCATGTTGTTGATTGCAGTGACCGCAACAATTCAAAATACTATA
TTGTTGTCGTTCAGTATACTGCCAATTTAATGCTGAAACTGTTAAAAGCTTCCTGTATTCACTCAATGATGGCAAGATAGCAAAAAAGAAATTCAACTTGAGACTTGCTC
CAGAGGAGATGTCTGCGAAACTAACTGGATATGAGCATAATGGAGTGACGTGCATTGGCATGAGAACGGATATTCCAGTGATTTTGGATGAAGCAATTGTGAAACTAAAT
CCTGATTATTTTTGGTTGGGCGGTGGAGAAATCGACCTGAAGTTGGGAATCAGGACATCGGAATTCATAAACCTTGTCAAACCCTTCATTATCAAGTGTAGTTAGAAGGA
CCCATTTTCACCCGGTTCGCCGCCCGAGCTCAACAACAAATCAAACACAACAGACTAATACTAGAAGGATCCAGGTTTTCAGTATTTGGTCCTATTTAAATTCTTTCTAC
TTCTGAGTATCAATTGTTTTGTATGTTCCAAATGAGGATGAAACCAAAAACAGAAAAAAAAAAAAAAAATTATTCATCATTCCTTAGAAATGGGATTCAGCTATTTAAAT
TGTTACAATCTAACCATTAAATGAACATTAATGATTTTGATTAATGGACCACTTTCAATTTTGAGGTGATTATGATGTGTGAGTGATAAGAAGTTAGTAGCAAACATATG
CAGAATTTGTTGTTCAAAATGGAACAACGTTGGAATTCATGTACGTAGAAGCAAGAACAAGCAGTGGTCATATCAATGCAATTGCCGGTGGCTTTTTGTGAACATTTATG
AGCCCTGCTCCTTTACTTGGCTGCTTATTGGCAAAGACTAAGGTTTGTTTTTGGTTTTCTCAACCATTTTTTGAAAGTTAAATTTTATTTTGAATCAATTATATTGTGTG
CATTTTTATTTTATTTTTTTAAATTATGATTTTGAG

Protein sequence

Show/hide protein sequence

MGTESEAMAEQNSMEALVKLEHRQTLILHRISNLELKYLPNLGSPPSSVPSDGADDDTVARLSAILRTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLCKSIVLI
NTQAPSHVVDCSDRNNSKYYIVVVQYTANLMLKLLKASCIHSMMAR

PI0006254 (gene) of Melon (PI 482460) v1 genome