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PI0006261 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006261
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGCK domain-containing protein
Genome locationchr10:19507410..19509109
RNA-Seq ExpressionPI0006261
SyntenyPI0006261
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446394.1 PREDICTED: transcription elongation factor spt5-like [Cucumis melo]2.2e-7188.17Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAE+NAAA+KTLEDQPQS S +HS+EK SEE+S  GKI ESGGGDE GED+    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEK+I PSASQ+DTNSDEQKASAGGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK

XP_011655692.1 uncharacterized protein LOC105435574 [Cucumis sativus]2.8e-7491.52Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAE+NAAATKTLEDQPQS +PN+SEEK SEE+S  GKI ESGGGDE GED+EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK
        VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEK+ TPSASQQDTNSDEQKAS GGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]6.0e-6177.27Show/hide
Query:  MSTSESKLQDAEAN--AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
        MSTSESKLQDAE+N  AAA KT EDQ Q G+PNHSEEK  +ES Q GKI ESGG DE GEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAEAN--AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASA
        DIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEK+ TP+A+QQ T+S            +EQKASA
Subjt:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASA

XP_023536143.1 uncharacterized protein LOC111797387 [Cucurbita pepo subsp. pepo]2.7e-6181.1Show/hide
Query:  MSTSESKLQDAEAN-AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKED
        MSTSESKLQDAE+N AAATKT EDQ Q G+PNHSEEK  EES Q GKI  SGG DE GEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKED
Subjt:  MSTSESKLQDAEAN-AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKED

Query:  IVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAG
        IVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEK+ TP+A+QQ T+S + +  AG
Subjt:  IVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAG

XP_038893081.1 uncharacterized protein LOC120081968 [Benincasa hispida]1.9e-7083.62Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAE+ AAATKTLEDQPQSGS N SEEK SEES+Q G+IPESGGGDEEGEDLEEEEEGECGFCLFMKGGGC+DSFI WEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASAGGK
        VEKCFEVTGALKKCMEAH DYYEPILKAEKMAEEEAIIELEK+ITP+A+QQ++NS            +EQKASAGGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASAGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein1.4e-7491.52Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTSESKLQDAE+NAAATKTLEDQPQS +PN+SEEK SEE+S  GKI ESGGGDE GED+EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK
        VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEK+ TPSASQQDTNSDEQKAS GGK
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK

A0A1S3BFM8 transcription elongation factor spt5-like1.1e-7188.17Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAE+NAAA+KTLEDQPQS S +HS+EK SEE+S  GKI ESGGGDE GED+    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEK+I PSASQ+DTNSDEQKASAGGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK

A0A5A7SVC8 Transcription elongation factor spt5-like1.1e-7188.17Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAE+NAAA+KTLEDQPQS S +HS+EK SEE+S  GKI ESGGGDE GED+    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDL----EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEK+I PSASQ+DTNSDEQKASAGGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK

A0A6J1G1F8 uncharacterized protein LOC1114498161.5e-6077.91Show/hide
Query:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI
        MSTS SKLQDAE+NAAATKTLED+ QSGSP   EEK S ES Q GKIPESG     GED EEEEEGECGFCLFMKGGGC+DSF+ WEKCIEEAEKNKEDI
Subjt:  MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDI

Query:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSA-------SQQDTNSDEQKASAGGK
        VEKCFEVTGALKKCMEAH DYYEPILKAEKMAEEEAIIELEK++TP A       ++   NS+EQKASAG K
Subjt:  VEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSA-------SQQDTNSDEQKASAGGK

A0A6J1K434 uncharacterized protein LOC1114921082.9e-6177.27Show/hide
Query:  MSTSESKLQDAEAN--AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE
        MSTSESKLQDAE+N  AAA KT EDQ Q G+PNHSEEK  +ES Q GKI ESGG DE GEDL+EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAEKNKE
Subjt:  MSTSESKLQDAEAN--AAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKE

Query:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASA
        DIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEK+ TP+A+QQ T+S            +EQKASA
Subjt:  DIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNS------------DEQKASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein3.5e-0637.23Show/hide
Query:  ESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELE
        + G      E  EEEE+GE  F  FM+GGGC++ F  WE C +EA             V   + KCM     D+Y P L A+K A+E    EL+
Subjt:  ESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELE

AT1G14060.1 GCK domain-containing protein3.4e-3050.3Show/hide
Query:  SESKLQ-DAEANAAATKTLEDQPQSGSPNHSEE--------KISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE
        S+ K Q + EA  A ++ L D   S +P  SEE        +  E+S    K  E GGGD +G     EEEGECGFCLFMKGGGC+DSF+AWE+C+E AE
Subjt:  SESKLQ-DAEANAAATKTLEDQPQSGSPNHSEE--------KISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE

Query:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKAS
        KNKEDIV  C EVT  LKKCM+ H DYY+PIL AEK AE E   ELE +      +++  S+E+ A+
Subjt:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKAS

AT5G02210.1 GCK domain-containing protein4.5e-1448.35Show/hide
Query:  EDLEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDI
        +++ EEE+ +  F  FMKGGGC++SF AW + C    EEAEKNK D+V KC  + G   KCM+ H DYY PIL  +K  EE     LEK++
Subjt:  EDLEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDI

AT5G57570.1 GCK domain-containing protein1.0e-1342.31Show/hide
Query:  PNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHPDYYEPILKA
        P+ ++ + S +  +   + E      EG+  EEEE GEC  C F+KGG C++SFIA E+C++EAE++ +E    KC EV    K CM  +P YYEPIL  
Subjt:  PNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTGALKKCMEAHPDYYEPILKA

Query:  EKMA
        E  A
Subjt:  EKMA

AT5G57640.1 GCK domain-containing protein1.3e-1337.23Show/hide
Query:  DAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEG----EDLE--EEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEK
        D +  +  T   + +    S   SE+++  + S+   + E  G +EE     EDL+  EEE GEC  C F+KGG C+++F   E C +EA+KN ED V K
Subjt:  DAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEG----EDLE--EEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEK

Query:  CFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIEL
        C E     K CM  +P YYEP+L  E  A  + + EL
Subjt:  CFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTCGGAGTCGAAACTCCAAGACGCAGAAGCTAACGCCGCCGCCACTAAAACCCTGGAAGATCAACCGCAATCGGGCTCCCCAAATCACTCTGAGGAAAAAAT
TTCAGAGGAATCAAGTCAGCCGGGAAAGATTCCCGAGAGTGGTGGTGGAGATGAAGAAGGAGAGGATCTAGAAGAGGAAGAGGAGGGGGAATGTGGATTTTGCTTGTTTA
TGAAAGGCGGTGGGTGCAGAGATAGCTTCATTGCGTGGGAGAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACTGGGGCA
TTGAAGAAATGTATGGAAGCTCATCCAGATTATTACGAACCGATTCTAAAGGCGGAGAAAATGGCTGAGGAGGAAGCGATTATAGAATTGGAGAAGGACATAACTCCAAG
TGCTTCCCAGCAGGATACGAATTCCGATGAACAGAAGGCCTCCGCGGGAGGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
CACAGAAGGGAGCTTCAACAACAAGGAAGAGAAAGGAAAGGAAACCCCTGTTGAGCTTGATTCATTCCTAAGGGTTTTTGGGGGTTTAAGCCGCCGGCGGTGGAACGACG
AACCATTCCGCCACAGCCTACCTAACGACATCGACACTGTCATCTTCGAATTTGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGC
AGAAGCTAACGCCGCCGCCACTAAAACCCTGGAAGATCAACCGCAATCGGGCTCCCCAAATCACTCTGAGGAAAAAATTTCAGAGGAATCAAGTCAGCCGGGAAAGATTC
CCGAGAGTGGTGGTGGAGATGAAGAAGGAGAGGATCTAGAAGAGGAAGAGGAGGGGGAATGTGGATTTTGCTTGTTTATGAAAGGCGGTGGGTGCAGAGATAGCTTCATT
GCGTGGGAGAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACTGGGGCATTGAAGAAATGTATGGAAGCTCATCCAGATTA
TTACGAACCGATTCTAAAGGCGGAGAAAATGGCTGAGGAGGAAGCGATTATAGAATTGGAGAAGGACATAACTCCAAGTGCTTCCCAGCAGGATACGAATTCCGATGAAC
AGAAGGCCTCCGCGGGAGGTAAGTGAAGTTGGTTGCTGCTCGTTAGATCTGATTCTTGAAGCGGAAAAACATCATTTTGTTGAGAGTACTTTAGTTTCTAGTCGATCTTT
TAACAGGCTGTGGAAGATATCTTCCTTAAACTCTGTCTTAGTGCACCTAAAGCTGATCCCTTTATCTGAAAGTATCATAGGAAAGAAGAGATCTTACCTTACATCACTTC
TGATTTAATTCAAATTTCTGAATAATTATTCATGCCATTGTTGTTTAGTATTATTTTTCACAATCATATTCCCTAATGCGTCCAGCTATGGTTGGAGACATTGGCAAAAA
TCATTACTTGTCACTTCATTTATGAACTATGTGTTCTTAATAAGAACTTCACTTGTGAACTGTATAA
Protein sequenceShow/hide protein sequence
MSTSESKLQDAEANAAATKTLEDQPQSGSPNHSEEKISEESSQPGKIPESGGGDEEGEDLEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGA
LKKCMEAHPDYYEPILKAEKMAEEEAIIELEKDITPSASQQDTNSDEQKASAGGK