; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006272 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006272
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNHL domain protein
Genome locationchr12:2357434..2358546
RNA-Seq ExpressionPI0006272
SyntenyPI0006272
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055216.1 uncharacterized protein E6C27_scaffold80G00570 [Cucumis melo var. makuwa]3.0e-8191.62Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
        MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP

Query:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        ATVKLGKFQYDPISYALNFDEGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Subjt:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG

XP_008438207.1 PREDICTED: uncharacterized protein LOC103483378 [Cucumis melo]2.6e-8091.02Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
        MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFDGEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP

Query:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        ATVKLGKFQYDPISYALNFDEGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Subjt:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG

XP_011660353.1 uncharacterized protein LOC105436380 [Cucumis sativus]1.2e-8292.17Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGHNGD DF+GDEY +GGGFQNFSDRFAA+ PAPVK SSSAAVNG
Subjt:  PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG

XP_023519821.1 uncharacterized protein LOC111783153 [Cucurbita pepo subsp. pepo]3.3e-7586.59Show/hide
Query:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDG FKE+ES   IDGADALLAS+RYSCFCFPCFG   S SD+LSWWER K KAKSTKFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV
        NRPA VKLGKFQYDPISYALNFDEGHNGD DFEGDEYS GGFQNFSDRF+AVPA  K SS AAV
Subjt:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV

XP_038894780.1 uncharacterized protein LOC120083201 [Benincasa hispida]2.9e-8490.96Show/hide
Query:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDGAFKELES   IDGADALLASKRYSCFCFPCFGPR S SD++SWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAVNG
        NRPATVKLGKFQYDPISYALNFD+GHNGD DF+GDEYSGGGFQNFSDRFAAVP PVK S + AVNG
Subjt:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAVNG

TrEMBL top hitse value%identityAlignment
A0A0A0LU30 Uncharacterized protein6.0e-8392.17Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        MGDRDGAFKELESIDGADALL SKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFD ED HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGED-HWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        PATVKLGKFQYDPISYALNFDEGHNGD DF+GDEY +GGGFQNFSDRFAA+ PAPVK SSSAAVNG
Subjt:  PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEY-SGGGFQNFSDRFAAV-PAPVKLSSSAAVNG

A0A1S3AWF8 uncharacterized protein LOC1034833781.2e-8091.02Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
        MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFDGEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP

Query:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        ATVKLGKFQYDPISYALNFDEGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Subjt:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG

A0A5A7ULQ3 Uncharacterized protein1.5e-8191.62Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
        MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP

Query:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        ATVKLGKFQYDPISYALNFDEGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Subjt:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG

A0A5D3BLD0 Uncharacterized protein1.2e-8091.02Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
        MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGP  SGSD+LSWWERVKTKAKSTKFDGEDHWWTG IRSLKKLREWSEIVAGPRWKTFIRRFNRNRP
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRP

Query:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG
        ATVKLGKFQYDPISYALNFDEGH NGD DFEG+ EY+ GGGFQNFSDRFAAV PAP+K SSS A+NG
Subjt:  ATVKLGKFQYDPISYALNFDEGH-NGDADFEGD-EYS-GGGFQNFSDRFAAV-PAPVKLSSSAAVNG

A0A6J1KJ01 uncharacterized protein LOC1114950352.7e-7585.98Show/hide
Query:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR
        MGDRDG FKE+ES   IDGADALLAS+RYSCFCFPCFG   S SD+LSWWER K KAKSTKFDGEDHWW+GGIRSLKKLREWSEIVAGPRWKTFIRRFNR
Subjt:  MGDRDGAFKELES---IDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR

Query:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV
        NRPA VKLGKFQYDPISYALNFDEGHNGD +FEGDEYS GGFQNFSDRF+AVPA  K SS AAV
Subjt:  NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)3.8e-2134.25Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCF-GPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR
        M  +     E+++ D     L +KR  CF  PC    + S      WW+R+ T     K + ++ WW   IR  +++REWSE+VAGPRWKT+IRRF R+ 
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCF-GPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNR

Query:  ----------------------PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSS
                                +   GKF+YD +SY+LNFD+G N    F+ DE+    ++++S RFAA   PV    S
Subjt:  ----------------------PATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSS

AT3G48020.1 unknown protein4.6e-1945.87Show/hide
Query:  SWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATV---KLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQN
        SWW+R+           E  WW   +R+  K+REWSEIVAGPRWKTFIRRFNR+           KF+YDP+SY L+F++    D     DE   GG ++
Subjt:  SWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATV---KLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQN

Query:  FSDRFAAVP
        FS R+A+VP
Subjt:  FSDRFAAVP

AT5G14890.1 NHL domain-containing protein1.8e-2339.18Show/hide
Query:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFG-PRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR--
        MG       E+++ D     + +KR  CF  PC G  + SG +   WW+R++T     K + ++ WW  G     K+REWSEIVAGP+WKTFIRRF R  
Subjt:  MGDRDGAFKELESIDGADALLASKRYSCFCFPCFG-PRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNR--

Query:  ----------NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSS
                  NRP  V    F+YD  SY+LNFD+G      FE DE+    ++++S RFAA   PV    S
Subjt:  ----------NRPATVKLGKFQYDPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSS

AT5G25240.1 unknown protein2.1e-0847.37Show/hide
Query:  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG
        G   LK L+E SE +AGP+WK FIR F+  R    +   F YD  +Y+LNFD+G +G
Subjt:  GIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQYDPISYALNFDEGHNG

AT5G62865.1 unknown protein1.1e-2350.76Show/hide
Query:  CFCFPCF-GPRGSGSDDLSWWERVKT---KAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYALNF
        C CFP F   R S +   S W R++T      S     E  WW   IR+  K+REWSEIVAGPRWKTFIRRFNR+ P   +      KFQYDP+SY+LNF
Subjt:  CFCFPCF-GPRGSGSDDLSWWERVKT---KAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVK----LGKFQYDPISYALNF

Query:  DEGHNGDADFEGDEYSG-GGFQNFSDRFAAVP
        D+      D E DEY G GG ++FS RFA+VP
Subjt:  DEGHNGDADFEGDEYSG-GGFQNFSDRFAAVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACCGAGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAGCCTCTAAACGCTATAGTTGTTTTTGTTTCCCTTGCTTTGGACCTCG
TGGGTCGGGTTCCGATGACCTTTCATGGTGGGAACGGGTAAAGACGAAAGCAAAATCCACGAAGTTTGACGGCGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCA
AGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACATTTATTCGCCGGTTCAATAGGAACCGTCCGGCTACTGTGAAGCTTGGGAAATTTCAATAT
GATCCTATAAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGCGGATTTCGAAGGGGATGAATACAGTGGTGGTGGGTTTCAAAACTTCTCAGACAGGTTTGC
TGCCGTGCCCGCGCCTGTGAAATTGTCTTCTTCTGCGGCGGTGAATGGTTAG
mRNA sequenceShow/hide mRNA sequence
TTTCGGATAATTCAACCACCGGCTAACAAACACTGGGCCCCCTCACTTTACCGGCAGTCTCCGGTCACCCACCGTTGGCTCTATATACAATACTGTTATTCTTTTCTGTA
AACCCTAATCTCTCTCTCTCTCTCTCTCTCTCTCTTCGGCCATGGGAGACCGAGACGGAGCTTTCAAGGAATTAGAATCAATCGATGGCGCCGATGCTCTTTTAGCCTCT
AAACGCTATAGTTGTTTTTGTTTCCCTTGCTTTGGACCTCGTGGGTCGGGTTCCGATGACCTTTCATGGTGGGAACGGGTAAAGACGAAAGCAAAATCCACGAAGTTTGA
CGGCGAAGATCACTGGTGGACCGGCGGAATCAGATCCCTCAAGAAGCTTCGTGAATGGTCGGAGATCGTCGCCGGTCCGAGATGGAAGACATTTATTCGCCGGTTCAATA
GGAACCGTCCGGCTACTGTGAAGCTTGGGAAATTTCAATATGATCCTATAAGTTACGCTTTGAATTTCGACGAGGGGCATAATGGGGATGCGGATTTCGAAGGGGATGAA
TACAGTGGTGGTGGGTTTCAAAACTTCTCAGACAGGTTTGCTGCCGTGCCCGCGCCTGTGAAATTGTCTTCTTCTGCGGCGGTGAATGGTTAGGATACGGCGGCAGTGGA
GATGGTCTTGTTTTCTCCGGTGAAGTTGAACGGGCGGTTGCCGTCGTGTACTGGAATTTAACGTATATTTTTCAACTGATGAGCTGGAAGTTGACCGTTTGCGGTGAAGT
AGGAGGCGCCAATGGCGGCGATACGCGTGTTAAAGATGATAGTTTACTATTTTTTTAATGGGTGACGTGTAGCTAAATGATTGGTGTTCATATTCTTATAGTTGATATAA
TTTTTGTTTTATTTTTTCTCCAAGTAAATTGTATAATTCCAAATTTCTCACATAGTTTTATTTATATAAACTCTTATTATCGATAGAGTGTGTATTTATTCTCTCTTTCT
TTTTGGGTTAGTTTTCTTTAAACGAAAGAAATCGAGTTAGGTAGTATGTATTATTCCAATTAAATTATTGTTGTTGTAAAATGTATATGGTTGGAATTAAAGGTTATTAT
ATTATTGTTTTAA
Protein sequenceShow/hide protein sequence
MGDRDGAFKELESIDGADALLASKRYSCFCFPCFGPRGSGSDDLSWWERVKTKAKSTKFDGEDHWWTGGIRSLKKLREWSEIVAGPRWKTFIRRFNRNRPATVKLGKFQY
DPISYALNFDEGHNGDADFEGDEYSGGGFQNFSDRFAAVPAPVKLSSSAAVNG