CuGenDBv2

Gene ID	PI0006290
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1
Genome location	chr07:22824301..22825944
RNA-Seq Expression	PI0006290
Synteny	PI0006290
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0043231 - intracellular membrane-bounded organelle (cellular component) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141282.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X2 [Cucumis sativus]

9.7e-43

95.88

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQGMEF++KDQNQSYD+KDSKDLSRNSRKV
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

XP_008452624.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucumis melo]

2.2e-42

95.88

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQGMEF+SKDQNQSYDIKDSKD SRNSRK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

XP_022159826.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1 [Momordica charantia]

1.3e-39

89.69

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQG+EF+ KDQNQSYD KDS DLSR+S++V
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

XP_022937244.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita moschata]

1.2e-40

92.71

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRM+FQGME ++KDQNQSYD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK

XP_022977146.1 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1 [Cucurbita maxima]

2.6e-40

91.67

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRM+FQGME ++KDQNQ+YD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L0F8 Uncharacterized protein

4.7e-43

95.88

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQGMEF++KDQNQSYD+KDSKDLSRNSRKV
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

A0A1S3BVF8 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1

1.0e-42

95.88

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQGMEF+SKDQNQSYDIKDSKD SRNSRK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

A0A6J1E543 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic-like isoform X1

6.4e-40

89.69

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV
        MVLTNFNGAGVGFGFGVGCGFG+GWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRM+FQG+EF+ KDQNQSYD KDS DLSR+S++V
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

A0A6J1F9U6 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1

5.7e-41

92.71

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRM+FQGME ++KDQNQSYD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK

A0A6J1IHM9 protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic isoform X1

1.3e-40

91.67

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Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK
        MVLTNFNGAGVGFGFG+GCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTA+GSKYRSSRM+FQGME ++KDQNQ+YD KDSKDLSRNSRK
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRK

SwissProt top hits

e value

%identity

Alignment

Q8VY77 Protein TRIGALACTOSYLDIACYLGLYCEROL 5, chloroplastic

3.2e-28

70.79

Show/hide

Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E  + D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD

Arabidopsis top hits

e value

%identity

Alignment

AT1G27695.1 glycine-rich protein

2.2e-29

70.79

Show/hide

Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E  + D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD

AT1G27695.2 glycine-rich protein

2.2e-29

70.79

Show/hide

Query:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD
        MVL++F G GVGFGFGVGCGFG+GWGFGGMP+N LG+GAGGGCGVGLGLGWGFGTAFGS YRSSR+ FQG+E  + D+ +      SK+
Subjt:  MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKD

AT4G10330.1 glycine-rich protein

9.5e-04

48.48

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Query:  GVGFGFGVGCGFGI------GWGFG-GMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVF
        G  FG GVGCGFG       G GFG G+P    GLG G GCG+G+G G+G G   G+ Y  SR  +
Subjt:  GVGFGFGVGCGFGI------GWGFG-GMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVF

Sequences

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CDS sequence

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ATGGTACTCACCAACTTCAATGGAGCTGGTGTTGGATTCGGTTTTGGTGTCGGTTGTGGGTTCGGCATAGGATGGGGTTTCGGAGGAATGCCTTTGAACTTCTTGGGCCT
TGGCGCGGGTGGTGGGTGTGGCGTTGGATTAGGACTTGGATGGGGATTTGGCACAGCCTTCGGGAGTAAGTATCGGTCCTCAAGGATGGTATTTCAGGGAATGGAATTTA
ACAGCAAGGATCAAAATCAGAGTTATGATATCAAGGACTCAAAAGATTTATCCAGAAATTCCAGAAAAGTTTGA

mRNA sequence

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Protein sequence

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MVLTNFNGAGVGFGFGVGCGFGIGWGFGGMPLNFLGLGAGGGCGVGLGLGWGFGTAFGSKYRSSRMVFQGMEFNSKDQNQSYDIKDSKDLSRNSRKV

PI0006290 (gene) of Melon (PI 482460) v1 genome