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PI0006291 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006291
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr09:8043136..8043590
RNA-Seq ExpressionPI0006291
SyntenyPI0006291
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.7e-3174.55Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPSTNL+ PS GV QMRPPASP SN ESSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

KAA0045303.1 hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa]2.1e-3173.64Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+  SSS N A SP++ADQYAMDLGFTTVTRS++RSSGIRI S TESSTPPRPSTNL+CPSGGV QMRP ASP SN E STPP TYSQ V
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

KAA0049709.1 hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]3.2e-3275.23Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PSTNL+ PSGGV QMR P SP SN +SSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNL
          +K  K L
Subjt:  ALEKCFKNL

KAA0051485.1 hypothetical protein E6C27_scaffold174G00040 [Cucumis melo var. makuwa]2.7e-3173.21Show/hide
Query:  GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQA
        GRGR +STSSKG+  SSS N APSPMSA+ YAMDLGFTT+ RS++R  GIRI SPTESSTPPR STNL+ PSGG+ QMRPPASP SN ESST P TYSQA
Subjt:  GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQA

Query:  VALEK--CFKNL
        V L+K   FKNL
Subjt:  VALEK--CFKNL

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]7.1e-3274.55Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP  NL+ PSG V QMRPPASP SN ESSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.3e-3174.55Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R  SS N APSP+SADQYAMDLGFTTVTR  +RS GI I SPTESSTPPRPSTNL+ PS GV QMRPPASP SN ESSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

A0A5A7TP36 Uncharacterized protein9.9e-3273.64Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+  SSS N A SP++ADQYAMDLGFTTVTRS++RSSGIRI S TESSTPPRPSTNL+CPSGGV QMRP ASP SN E STPP TYSQ V
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

A0A5A7U8A0 Uncharacterized protein1.5e-3275.23Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R SSS N  PSPMSADQYAMDLGFTTVTRS++RSS IRI SPTESSTPP+PSTNL+ PSGGV QMR P SP SN +SSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNL
          +K  K L
Subjt:  ALEKCFKNL

A0A5A7UCU9 Uncharacterized protein1.3e-3173.21Show/hide
Query:  GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQA
        GRGR +STSSKG+  SSS N APSPMSA+ YAMDLGFTT+ RS++R  GIRI SPTESSTPPR STNL+ PSGG+ QMRPPASP SN ESST P TYSQA
Subjt:  GRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQA

Query:  VALEK--CFKNL
        V L+K   FKNL
Subjt:  VALEK--CFKNL

A0A5D3CKX1 Uncharacterized protein3.4e-3274.55Show/hide
Query:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV
        RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP  NL+ PSG V QMRPPASP SN ESSTPP TYSQAV
Subjt:  RGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAV

Query:  ALEKCFKNLP
          +K F   P
Subjt:  ALEKCFKNLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGACCAATCTTG
TCTGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATATGGAGTCATCAACTCCTCCCATAACATATTCTCAGGCCGTCGCTCTAGAAAAA
TGTTTCAAAAATCTTCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATAGTTCGTGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACCAAATCCTGCACCCTCACCCATGAGTGCAGATCAATATGC
AATGGATTTAGGGTTTACTACGGTAACCCGATCTAAGGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGACCAATCTTG
TCTGTCCTTCTGGCGGAGTAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATATGGAGTCATCAACTCCTCCCATAACATATTCTCAGGCCGTCGCTCTAGAAAAA
TGTTTCAAAAATCTTCCCTGA
Protein sequenceShow/hide protein sequence
MSIVRGRGRVSSTSSKGSRLSSSPNPAPSPMSADQYAMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSTNLVCPSGGVTQMRPPASPLSNMESSTPPITYSQAVALEK
CFKNLP