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PI0006301 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006301
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal protein L35A
Genome locationchr10:15157450..15159965
RNA-Seq ExpressionPI0006301
SyntenyPI0006301
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001780 - Ribosomal protein L35A
IPR009000 - Translation protein, beta-barrel domain superfamily
IPR018266 - Ribosomal protein L35Ae, conserved site
IPR038661 - Ribosomal protein L35A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6763705.1 hypothetical protein POTOM_031141 [Populus tomentosa]9.3e-4884.07Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKK GSHYRCIWGKV RPHGNSG+VRAKFKSNLPP   V
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  TGSEYSCTRATFE
           E+SC RATFE
Subjt:  TGSEYSCTRATFE

KAG6765379.1 hypothetical protein POTOM_029418 [Populus tomentosa]9.3e-4884.07Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKK GSHYRCIWGKV RPHGNSG+VRAKFKSNLPP   V
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  TGSEYSCTRATFE
           E+SC RATFE
Subjt:  TGSEYSCTRATFE

KHG28839.1 60S ribosomal L35a-3 -like protein [Gossypium arboreum]4.2e-4883.62Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPP   V
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  T---GSEYSCTRATFE
        +    SE SCT ATFE
Subjt:  T---GSEYSCTRATFE

XP_008463199.1 PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo]5.5e-48100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

XP_039067467.1 60S ribosomal protein L35a-1-like [Hibiscus syriacus]1.0e-4985.84Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKKNGS YRCIWGKVARPHGNSG+VRAKFKSNLPP  W 
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  TGSEYSCTRATFE
          SE SCT ATFE
Subjt:  TGSEYSCTRATFE

TrEMBL top hitse value%identityAlignment
A0A0A0KM11 Uncharacterized protein2.7e-48100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

A0A0B0PWN4 60S ribosomal L35a-3-like protein2.0e-4883.62Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKKNGSHYRCIWGKV RPHGNSG+VRAKFKSNLPP   V
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  T---GSEYSCTRATFE
        +    SE SCT ATFE
Subjt:  T---GSEYSCTRATFE

A0A1S3CIN8 60S ribosomal protein L35a-12.7e-48100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

A0A5A7T1I6 Ribosomal protein L35A2.7e-48100Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

A0A6A3BSW1 60S ribosomal protein L35a-34.8e-5085.84Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+K+EV+WY GKR+AYIYKAKVKKNGS YRCIWGKVARPHGNSG+VRAKFKSNLPP  W 
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWV

Query:  TGSEYSCTRATFE
          SE SCT ATFE
Subjt:  TGSEYSCTRATFE

SwissProt top hitse value%identityAlignment
P41056 60S ribosomal protein L33-B1.7e-2053.41Show/hide
Query:  ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLP
        E  RLY +G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS  R +WGKV R HGNSG+VRA F++NLP
Subjt:  ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLP

P51422 60S ribosomal protein L35a-41.3e-4485.26Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPP
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

Q9C912 60S ribosomal protein L35a-37.0e-4687.5Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

Q9FZH0 60S ribosomal protein L35a-21.0e-4485.26Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPP
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

Q9LMK0 60S ribosomal protein L35a-17.0e-4687.5Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

Arabidopsis top hitse value%identityAlignment
AT1G07070.1 Ribosomal protein L35Ae family protein4.9e-4787.5Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

AT1G41880.1 Ribosomal protein L35Ae family protein7.1e-4685.26Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPP
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

AT1G74270.1 Ribosomal protein L35Ae family protein4.9e-4787.5Show/hide
Query:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPP
Subjt:  MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP

AT3G55750.1 Ribosomal protein L35Ae family protein9.3e-4685.26Show/hide
Query:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP
        +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPP
Subjt:  VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGAT
CGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAAGCTAAAGTGAAGAAGAATGGATCCCATTATCGTTGCATTTGGG
GCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACCAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCGAGCA
ACATTTGAGCCTGGAGAACCGGATTGA
mRNA sequenceShow/hide mRNA sequence
CGGCCGTCAAACACTCCATAGCTGAAGCAGAAACCCGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACCAGGGGAACAATTCTCGGCTACAAGA
GGTCGAAGTCGAACCAGTACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAGGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAA
GCTAAAGTGAAGAAGAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAAGTCTAATCTCCCACC
AAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCGAGCAACATTTGAGCCTGGAGAACCGGATTGAAACAAAGTGTTTGCTACATGAAGGGATCTATATTTTTATT
ATATTTTGTGAGCTAAGATAGAAGCATTTTATGTTTCTGAACTGAGTCATTTTTTGCTGTTTAGGTAATGTTTAACACCCGAGTAGTTAAAACAGAATTATAGAACCATT
TGTCTTGAGGATTGTCATGTGTTTAAGCGAATTGCACTTTTATCAAGTGGTTTTTCCGTATTAAAGTCTCTATGCACTTGCATTTTTTTAGCTATTCTGAAGTTAGATTA
TGATTCTTATCGTAATTCTTTGGTTATTATCCTCTCTATACCACTTATGTGATTCACGTCTTGACCTCTTGCTAGCAAAACTTTTGTTATTTTCTCTTCTCCAGTTTCTT
TCTTTTTTTCTTTTTCTTTGGTGCGACCAAAACTTCTTTGGC
Protein sequenceShow/hide protein sequence
MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPSPWVTGSEYSCTRA
TFEPGEPD