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PI0006316 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006316
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr07:5941742..5942278
RNA-Seq ExpressionPI0006316
SyntenyPI0006316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]4.8e-1845.51Show/hide
Query:  MAILQVNAAGGSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHARYQNNRPQHS--HHQQQPTTTAPSTSSMENL
        MA+ QV+A G  V A  Q+D+M  VGCG                             G++RGEA   H +   +RP +S   HQQ  T T  S SSM  L
Subjt:  MAILQVNAAGGSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHARYQNNRPQHS--HHQQQPTTTAPSTSSMENL

Query:  LREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        LR+YMQ+ DA +QSQT+SI NLE+ LGQLA D SGRP GSLPSN E PN   G  K
Subjt:  LREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

KAA0041246.1 uncharacterized protein E6C27_scaffold128G002220 [Cucumis melo var. makuwa]5.1e-1266.15Show/hide
Query:  PSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        P  +   N ++   Q  DALLQSQ SSI+NLE+QLGQL S++S RP+GSLPSNTETPNQVGGSGK
Subjt:  PSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

KAA0049612.1 hypothetical protein E6C27_scaffold163G00690 [Cucumis melo var. makuwa]3.9e-1268.33Show/hide
Query:  MENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        ME LLREYMQ+ DALLQ+Q +SI+NL++QL QLASD+SGRP+GSLP++T+TPN+VG   K
Subjt:  MENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

TYK27798.1 hypothetical protein E5676_scaffold749G00200 [Cucumis melo var. makuwa]3.4e-1655.45Show/hide
Query:  GCVGCG---------GDHRGEASGSHARYQNNRPQHS-HHQQQPTTTAPS-TSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLP
        GCV CG         G + G+ASG   R   +RP HS   QQQ TT  PS +SSME L+R YM++ DALLQSQ +SIRNLE+Q+GQ+A D S RPQ  LP
Subjt:  GCVGCG---------GDHRGEASGSHARYQNNRPQHS-HHQQQPTTTAPS-TSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLP

Query:  SNTETPNQVG
        SNTE  NQ G
Subjt:  SNTETPNQVG

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]1.1e-1155.7Show/hide
Query:  QNNRPQHSHHQQQPTTTAPSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVG
        Q  RPQ  H  Q        TSS+E+L+R+YM K DA++QSQ +S+RNLEVQLGQLA+D+  RPQG+LPS+TE P + G
Subjt:  QNNRPQHSHHQQQPTTTAPSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVG

TrEMBL top hitse value%identityAlignment
A0A0A0KMN3 Uncharacterized protein2.1e-1950.38Show/hide
Query:  MAILQVNAAGGSVHAANQIDDMGCVGCGGDHRGEASGSHARYQNNRPQH-----SHH-QQQPTTTAPSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQ
        MA+L+VNAAG S+   +Q  ++G V CGG   GE SG   R  +  PQ      +HH   Q  +++ S  SME+L +EYMQ+ DALLQSQ +SI+NLE+Q
Subjt:  MAILQVNAAGGSVHAANQIDDMGCVGCGGDHRGEASGSHARYQNNRPQH-----SHH-QQQPTTTAPSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQ

Query:  LGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        +GQ+A+D+S +P+G+LPSNTE P Q G SGK
Subjt:  LGQLASDVSGRPQGSLPSNTETPNQVGGSGK

A0A5A7TGS2 Uncharacterized protein2.5e-1266.15Show/hide
Query:  PSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        P  +   N ++   Q  DALLQSQ SSI+NLE+QLGQL S++S RP+GSLPSNTETPNQVGGSGK
Subjt:  PSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

A0A5A7U1G5 Uncharacterized protein1.9e-1268.33Show/hide
Query:  MENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        ME LLREYMQ+ DALLQ+Q +SI+NL++QL QLASD+SGRP+GSLP++T+TPN+VG   K
Subjt:  MENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

A0A5D3D2S0 Uncharacterized protein2.3e-1845.51Show/hide
Query:  MAILQVNAAGGSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHARYQNNRPQHS--HHQQQPTTTAPSTSSMENL
        MA+ QV+A G  V A  Q+D+M  VGCG                             G++RGEA   H +   +RP +S   HQQ  T T  S SSM  L
Subjt:  MAILQVNAAGGSVHAANQIDDMGCVGCG-----------------------------GDHRGEASGSHARYQNNRPQHS--HHQQQPTTTAPSTSSMENL

Query:  LREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK
        LR+YMQ+ DA +QSQT+SI NLE+ LGQLA D SGRP GSLPSN E PN   G  K
Subjt:  LREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLPSNTETPNQVGGSGK

A0A5D3DWD5 Uncharacterized protein1.7e-1655.45Show/hide
Query:  GCVGCG---------GDHRGEASGSHARYQNNRPQHS-HHQQQPTTTAPS-TSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLP
        GCV CG         G + G+ASG   R   +RP HS   QQQ TT  PS +SSME L+R YM++ DALLQSQ +SIRNLE+Q+GQ+A D S RPQ  LP
Subjt:  GCVGCG---------GDHRGEASGSHARYQNNRPQHS-HHQQQPTTTAPS-TSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSLP

Query:  SNTETPNQVG
        SNTE  NQ G
Subjt:  SNTETPNQVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATTGCAAGTCAATGCCGCGGGAGGCTCTGTGCATGCAGCAAACCAAATTGATGACATGGGATGTGTGGGATGCGGCGGTGACCATCGCGGGGAAGCATCTGG
CTCCCACGCGAGGTACCAGAATAATAGACCCCAACACTCCCATCATCAACAACAACCCACCACCACTGCTCCATCCACTTCATCTATGGAAAACCTCCTCCGCGAATACA
TGCAGAAAATGGATGCTCTTCTGCAAAGTCAAACTTCATCAATTCGTAATCTGGAGGTACAATTAGGGCAGCTTGCCAGTGATGTCTCCGGAAGACCACAGGGATCTCTC
CCAAGCAATACAGAAACGCCAAATCAGGTGGGGGGATCTGGTAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATTGCAAGTCAATGCCGCGGGAGGCTCTGTGCATGCAGCAAACCAAATTGATGACATGGGATGTGTGGGATGCGGCGGTGACCATCGCGGGGAAGCATCTGG
CTCCCACGCGAGGTACCAGAATAATAGACCCCAACACTCCCATCATCAACAACAACCCACCACCACTGCTCCATCCACTTCATCTATGGAAAACCTCCTCCGCGAATACA
TGCAGAAAATGGATGCTCTTCTGCAAAGTCAAACTTCATCAATTCGTAATCTGGAGGTACAATTAGGGCAGCTTGCCAGTGATGTCTCCGGAAGACCACAGGGATCTCTC
CCAAGCAATACAGAAACGCCAAATCAGGTGGGGGGATCTGGTAAATAG
Protein sequenceShow/hide protein sequence
MAILQVNAAGGSVHAANQIDDMGCVGCGGDHRGEASGSHARYQNNRPQHSHHQQQPTTTAPSTSSMENLLREYMQKMDALLQSQTSSIRNLEVQLGQLASDVSGRPQGSL
PSNTETPNQVGGSGK