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PI0006349 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006349
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCASP-like protein
Genome locationchr12:16895644..16896081
RNA-Seq ExpressionPI0006349
SyntenyPI0006349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652815.1 hypothetical protein Csa_023994, partial [Cucumis sativus]1.0e-2196.3Show/hide
Query:  LDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPMPTAFLTL
        LDLWKRFSDHFRKSF KEQQRELGWNNIF RGLGVTAPKARTRDKPMPTAFLTL
Subjt:  LDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPMPTAFLTL

KAG6583714.1 hypothetical protein SDJN03_19646, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1682.76Show/hide
Query:  FILLDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPM-PTAFLTL
        F  LDLW R SDHFRKSF KE Q+ELGW NIFCRGLGVTAPKARTRDKPM  TAFLTL
Subjt:  FILLDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPM-PTAFLTL

KAG7019361.1 hypothetical protein SDJN02_18321 [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1685.45Show/hide
Query:  LDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPM-PTAFLTL
        LDLW R SDHFRKSF KE Q+ELGW NIFCRGLGVTAPKARTRDKPM  TAFLTL
Subjt:  LDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPM-PTAFLTL

TKR98526.1 Casparian strip membrane protein [Populus alba]2.5e-0450Show/hide
Query:  SIFILLDLW----KRFSDHFRKSF--GKEQQRELGWNNIFCRGLGVTAPKARTRDKPM
        S+ I L  W    K     FRKSF    ++   LGW N F  G+G+TAPKARTRDKPM
Subjt:  SIFILLDLW----KRFSDHFRKSF--GKEQQRELGWNNIFCRGLGVTAPKARTRDKPM

TrEMBL top hitse value%identityAlignment
A0A4U5PQ38 CASP-like protein1.2e-0450Show/hide
Query:  SIFILLDLW----KRFSDHFRKSF--GKEQQRELGWNNIFCRGLGVTAPKARTRDKPM
        S+ I L  W    K     FRKSF    ++   LGW N F  G+G+TAPKARTRDKPM
Subjt:  SIFILLDLW----KRFSDHFRKSF--GKEQQRELGWNNIFCRGLGVTAPKARTRDKPM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCATCTTCATTCTCTTGGACTTGTGGAAGCGCTTCTCTGATCATTTCCGGAAATCGTTTGGCAAGGAGCAGCAGAGGGAGCTGGGCTGGAACAATATTTTTTG
CCGAGGTTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGACAAACCCATGCCTACTGCCTTCTTGACTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCCATCTTCATTCTCTTGGACTTGTGGAAGCGCTTCTCTGATCATTTCCGGAAATCGTTTGGCAAGGAGCAGCAGAGGGAGCTGGGCTGGAACAATATTTTTTG
CCGAGGTTTGGGTGTCACTGCTCCCAAGGCAAGAACTCGTGACAAACCCATGCCTACTGCCTTCTTGACTCTCTAA
Protein sequenceShow/hide protein sequence
MDSIFILLDLWKRFSDHFRKSFGKEQQRELGWNNIFCRGLGVTAPKARTRDKPMPTAFLTL