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PI0006376 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006376
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:13687699..13687908
RNA-Seq ExpressionPI0006376
SyntenyPI0006376
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.5e-1771.64Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLS
        MDT     NI+NIC +KHLQ YQI KSTNKNQR KR++ NIE RVD +NQLEID+V+VVEHIDFLLS
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLS

KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]2.6e-0577.78Show/hide
Query:  YQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQ
        YQI KSTNKNQR KR+Q NIEF+VD DNQLEID++Q
Subjt:  YQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQ

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.5e-1672.73Show/hide
Query:  GATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLSFK
        G    NI NIC +KHLQ YQI KSTNKNQR KR++ NIEFRV+ DNQL+ID VQVVEHIDFLLS K
Subjt:  GATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLSFK

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-1169.64Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNV
        MD      NI NIC +KHLQ YQI KSTNKNQR KR++ NIEFRVD DNQLEID+V
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.7e-0463.41Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNI
        MD   T  NI NIC +KHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNI

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein7.0e-1772.73Show/hide
Query:  GATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLSFK
        G    NI NIC +KHLQ YQI KSTNKNQR KR++ NIEFRV+ DNQL+ID VQVVEHIDFLLS K
Subjt:  GATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLSFK

A0A5A7TI03 Stress-response A/B barrel domain-containing protein1.2e-0577.78Show/hide
Query:  YQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQ
        YQI KSTNKNQR KR+Q NIEF+VD DNQLEID++Q
Subjt:  YQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQ

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-1169.64Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNV
        MD      NI NIC +KHLQ YQI KSTNKNQR KR++ NIEFRVD DNQLEID+V
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.1e-1771.64Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLS
        MDT     NI+NIC +KHLQ YQI KSTNKNQR KR++ NIE RVD +NQLEID+V+VVEHIDFLLS
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLS

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X21.8e-0463.41Show/hide
Query:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNI
        MD   T  NI NIC +KHLQ YQI KSTNKNQR KR++ +I
Subjt:  MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACGGGCGCGACCGCAGAGAACATAATAAATATTTGTACTATAAAACACTTGCAGACGTATCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAGGGCAACATAGAGTTCAGAGTCGACGGCGACAACCAGCTCGAAATCGACAACGTTCAGGTTGTGGAACACATTGATTTTCTTTTATCTTTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACGGGCGCGACCGCAGAGAACATAATAAATATTTGTACTATAAAACACTTGCAGACGTATCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAG
TCAGGGCAACATAGAGTTCAGAGTCGACGGCGACAACCAGCTCGAAATCGACAACGTTCAGGTTGTGGAACACATTGATTTTCTTTTATCTTTTAAATGA
Protein sequenceShow/hide protein sequence
MDTGATAENIINICTIKHLQTYQIHKSTNKNQRIKRSQGNIEFRVDGDNQLEIDNVQVVEHIDFLLSFK