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PI0006386 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006386
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr07:8525202..8525612
RNA-Seq ExpressionPI0006386
SyntenyPI0006386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035757.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.7e-1347.12Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY
        MKVT I+EAND+AT+K+DKL  SLR F+L   D       G+A   VS+++P Q K++  D++ A SI LL KQ +K+  +FN+  GNYG  +N+D G+ 
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY

Query:  SSAS
        SS+S
Subjt:  SSAS

KAA0058310.1 F-box protein PP2-B10-like [Cucumis melo var. makuwa]1.1e-1051.81Show/hide
Query:  VSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNYSSASSAPFPARKRRENDKSGGGSHTKIDR
        +SD+E HQGKDK  DEN A  IALLTKQF KV   FN+   NY G +N+D  NYSSA+       +RRE++KS   SH K ++
Subjt:  VSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNYSSASSAPFPARKRRENDKSGGGSHTKIDR

KAA0065593.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.3e-1240.16Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNRDLGNYS
        MKV  IEEAND+ T+KLD+L  SLR FEL+ +D       G+A   ++D  P   K++  D+N A S ALLTKQ +K+  +F++   NY   +    N+S
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNRDLGNYS

Query:  ----SASSAPFPARKRRENDKS
            S+S + + A K ++ DKS
Subjt:  ----SASSAPFPARKRRENDKS

TYK29697.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.1e-1036.5Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNR-----D
        MKVT IEEAND+ T KLD+L  SLR FEL  +D        +    VS++       +  DEN A ++ALL+++F+K   +F +  G +G  +      +
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNR-----D

Query:  LGNYSSASSAPFPARKRRENDKSGGGSHTKIDRSFRC
          N  S S + F A +RR+ D+    S  +IDRS +C
Subjt:  LGNYSSASSAPFPARKRRENDKSGGGSHTKIDRSFRC

TYK29861.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.6e-1339.55Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY
        MKVT I+EAND+AT+K+DKL  SLR F+L   D       G+A   VS+++P Q K++  D++ A SI L  KQ +K+  +FN+  GNYG  +N+D G+ 
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY

Query:  SSASSAPF-PARKRRENDKSGGGSHTKIDRSFRC
        SS+S   + P  + R    +     T++   F+C
Subjt:  SSASSAPF-PARKRRENDKSGGGSHTKIDRSFRC

TrEMBL top hitse value%identityAlignment
A0A5A7T2G5 Gag-pol polyprotein8.4e-1447.12Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY
        MKVT I+EAND+AT+K+DKL  SLR F+L   D       G+A   VS+++P Q K++  D++ A SI LL KQ +K+  +FN+  GNYG  +N+D G+ 
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY

Query:  SSAS
        SS+S
Subjt:  SSAS

A0A5A7UT54 F-box protein PP2-B10-like5.1e-1151.81Show/hide
Query:  VSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNYSSASSAPFPARKRRENDKSGGGSHTKIDR
        +SD+E HQGKDK  DEN A  IALLTKQF KV   FN+   NY G +N+D  NYSSA+       +RRE++KS   SH K ++
Subjt:  VSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNYSSASSAPFPARKRRENDKSGGGSHTKIDR

A0A5D3C743 Gag-pol polyprotein3.5e-1240.16Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNRDLGNYS
        MKV  IEEAND+ T+KLD+L  SLR FEL+ +D       G+A   ++D  P   K++  D+N A S ALLTKQ +K+  +F++   NY   +    N+S
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNRDLGNYS

Query:  ----SASSAPFPARKRRENDKS
            S+S + + A K ++ DKS
Subjt:  ----SASSAPFPARKRRENDKS

A0A5D3E0S6 Receptor-like protein 125.1e-1136.5Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNR-----D
        MKVT IEEAND+ T KLD+L  SLR FEL  +D        +    VS++       +  DEN A ++ALL+++F+K   +F +  G +G  +      +
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNR-----D

Query:  LGNYSSASSAPFPARKRRENDKSGGGSHTKIDRSFRC
          N  S S + F A +RR+ D+    S  +IDRS +C
Subjt:  LGNYSSASSAPFPARKRRENDKSGGGSHTKIDRSFRC

A0A5D3E2N4 Gag-pol polyprotein4.2e-1339.55Show/hide
Query:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY
        MKVT I+EAND+AT+K+DKL  SLR F+L   D       G+A   VS+++P Q K++  D++ A SI L  KQ +K+  +FN+  GNYG  +N+D G+ 
Subjt:  MKVTAIEEANDVATLKLDKLLRSLRMFELMFDD------KGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGG-HNRDLGNY

Query:  SSASSAPF-PARKRRENDKSGGGSHTKIDRSFRC
        SS+S   + P  + R    +     T++   F+C
Subjt:  SSASSAPF-PARKRRENDKSGGGSHTKIDRSFRC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTTACTGCGATTGAGGAAGCGAATGACGTAGCCACCTTAAAATTGGATAAACTATTGAGGTCTCTACGTATGTTCGAACTGATGTTTGATGATAAGGGGTTGGC
TTTCCATTTTGTGAGTGATGAAGAACCTCATCAAGGAAAAGACAAATGTAGTGATGAAAATCCAGCTGCCTCAATTGCTCTTCTAACTAAACAGTTCACCAAGGTCGTGC
ATAGGTTCAATGAACATCCTGGTAATTATGGAGGACATAACAGAGACCTTGGAAACTATAGCAGTGCAAGTTCTGCACCGTTTCCTGCTCGAAAGAGGAGAGAGAATGAT
AAGAGTGGGGGTGGTAGCCATACCAAGATCGACAGAAGTTTTAGGTGCGTGACTATGAAGGCTTTGGCCATTTTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTTACTGCGATTGAGGAAGCGAATGACGTAGCCACCTTAAAATTGGATAAACTATTGAGGTCTCTACGTATGTTCGAACTGATGTTTGATGATAAGGGGTTGGC
TTTCCATTTTGTGAGTGATGAAGAACCTCATCAAGGAAAAGACAAATGTAGTGATGAAAATCCAGCTGCCTCAATTGCTCTTCTAACTAAACAGTTCACCAAGGTCGTGC
ATAGGTTCAATGAACATCCTGGTAATTATGGAGGACATAACAGAGACCTTGGAAACTATAGCAGTGCAAGTTCTGCACCGTTTCCTGCTCGAAAGAGGAGAGAGAATGAT
AAGAGTGGGGGTGGTAGCCATACCAAGATCGACAGAAGTTTTAGGTGCGTGACTATGAAGGCTTTGGCCATTTTCAAGTAG
Protein sequenceShow/hide protein sequence
MKVTAIEEANDVATLKLDKLLRSLRMFELMFDDKGLAFHFVSDEEPHQGKDKCSDENPAASIALLTKQFTKVVHRFNEHPGNYGGHNRDLGNYSSASSAPFPARKRREND
KSGGGSHTKIDRSFRCVTMKALAIFK