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PI0006438 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006438
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCLAVATA3/ESR-related protein
Genome locationchr05:16680366..16680626
RNA-Seq ExpressionPI0006438
SyntenyPI0006438
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574868.1 CLAVATA3/ESR (CLE)-related protein TDIF, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1156.82Show/hide
Query:  MAKYFEDYL--------KSQACFFLFLLVLLLHVVPHCFSTVPNT------PSRPPSN-SMA-------MFEAAMHEVPSGPNPTSNK
        MAK+ ++Y         KSQACFFLFLLVLLL  VP+ FST P++      PSRPPS+ +MA        FEA+MHEVPSGPNPTSNK
Subjt:  MAKYFEDYL--------KSQACFFLFLLVLLLHVVPHCFSTVPNT------PSRPPSN-SMA-------MFEAAMHEVPSGPNPTSNK

KAG6593788.1 hypothetical protein SDJN03_13264, partial [Cucurbita argyrosperma subsp. sororia]8.2e-0954.43Show/hide
Query:  KSQACFFLFLLVLLLHVVPHCFSTVP-----NTPSRPPSNSMAM-----------------FEAAMHEVPSGPNPTSNK
        KS+ACFFLFLL+L     P+ FST+P     +TPSRPPS+S+AM                 FEAAMHEVPSGPNPT+NK
Subjt:  KSQACFFLFLLVLLLHVVPHCFSTVP-----NTPSRPPSNSMAM-----------------FEAAMHEVPSGPNPTSNK

KGN61461.1 hypothetical protein Csa_006135 [Cucumis sativus]4.0e-2492.42Show/hide
Query:  MAKYFEDYLKSQACFFLFLLVLLLHVVPHCFSTVPNTPSRPPSNSMAMFEAAMHEVPSGPNPTSNK
        MAK+FEDYLKSQACFFLFLLVLLL VVPH  STVPNTPSRPPSN MAMFEAAMHEVPSGPNPTSNK
Subjt:  MAKYFEDYLKSQACFFLFLLVLLLHVVPHCFSTVPNTPSRPPSNSMAMFEAAMHEVPSGPNPTSNK

TrEMBL top hitse value%identityAlignment
A0A0A0LNB8 CLAVATA3/ESR-related protein2.0e-2492.42Show/hide
Query:  MAKYFEDYLKSQACFFLFLLVLLLHVVPHCFSTVPNTPSRPPSNSMAMFEAAMHEVPSGPNPTSNK
        MAK+FEDYLKSQACFFLFLLVLLL VVPH  STVPNTPSRPPSN MAMFEAAMHEVPSGPNPTSNK
Subjt:  MAKYFEDYLKSQACFFLFLLVLLLHVVPHCFSTVPNTPSRPPSNSMAMFEAAMHEVPSGPNPTSNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAATATTTTGAAGATTATTTGAAGTCGCAAGCTTGCTTCTTCCTCTTCCTCCTCGTTCTCCTTCTTCACGTCGTTCCTCACTGCTTCTCGACAGTGCCGAATAC
TCCATCTCGTCCTCCTTCAAATTCTATGGCCATGTTTGAAGCAGCTATGCATGAAGTCCCTAGCGGTCCAAATCCCACATCCAACAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAATATTTTGAAGATTATTTGAAGTCGCAAGCTTGCTTCTTCCTCTTCCTCCTCGTTCTCCTTCTTCACGTCGTTCCTCACTGCTTCTCGACAGTGCCGAATAC
TCCATCTCGTCCTCCTTCAAATTCTATGGCCATGTTTGAAGCAGCTATGCATGAAGTCCCTAGCGGTCCAAATCCCACATCCAACAAGTAA
Protein sequenceShow/hide protein sequence
MAKYFEDYLKSQACFFLFLLVLLLHVVPHCFSTVPNTPSRPPSNSMAMFEAAMHEVPSGPNPTSNK