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PI0006464 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006464
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:11164100..11166230
RNA-Seq ExpressionPI0006464
SyntenyPI0006464
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026071.1 uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]7.3e-1866.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + AN  KSS+FV GV+ E A+ LA   GFA   LPVRYLG+PLL+GRLRS+DC  LI RITSQI  W+ARVLSF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
KAA0037824.1 uncharacterized protein E6C27_scaffold113G00050 [Cucumis melo var. makuwa]1.6e-1763.75Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        ++ANLGKSS+FVVG   E A+ +A S GF L  LPVRYLG+PLL+GRL  +DC  LI RITS+I  W+ RVLS+VGRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
KAA0060725.1 uncharacterized protein E6C27_scaffold72G00120 [Cucumis melo var. makuwa]1.2e-1766.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + ANL KSS+FV GV  E A+ LA S GF L  LPVRYLG+PLL+GRLRS+DC  LI RITS I  W+ARVLSF G LQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
KAA0062333.1 putative reverse transcriptase [Cucumis melo var. makuwa]5.6e-1867.5Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        +  NL K+SMFV GV+ E A+ LA S GF L  LPVRYLG+PLLSGRLRSSDC  LI RITS+I  W ARV SF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
TYK28099.1 uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]7.3e-1866.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + AN  KSS+FV GV+ E A+ LA   GFA   LPVRYLG+PLL+GRLRS+DC  LI RITSQI  W+ARVLSF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
TrEMBL top hitse value%identityAlignment
A0A5A7SPE5 Reverse transcriptase domain-containing protein3.5e-1866.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + AN  KSS+FV GV+ E A+ LA   GFA   LPVRYLG+PLL+GRLRS+DC  LI RITSQI  W+ARVLSF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
A0A5A7T2Y1 Uncharacterized protein7.8e-1863.75Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        ++ANLGKSS+FVVG   E A+ +A S GF L  LPVRYLG+PLL+GRL  +DC  LI RITS+I  W+ RVLS+VGRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
A0A5A7V2L9 Putative reverse transcriptase2.7e-1867.5Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        +  NL K+SMFV GV+ E A+ LA S GF L  LPVRYLG+PLLSGRLRSSDC  LI RITS+I  W ARV SF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
A0A5A7V4C1 Reverse transcriptase domain-containing protein6.0e-1866.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + ANL KSS+FV GV  E A+ LA S GF L  LPVRYLG+PLL+GRLRS+DC  LI RITS I  W+ARVLSF G LQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
A0A5D3DXE4 Reverse transcriptase domain-containing protein3.5e-1866.25Show/hide
Query:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + AN  KSS+FV GV+ E A+ LA   GFA   LPVRYLG+PLL+GRLRS+DC  LI RITSQI  W+ARVLSF GRLQL
Subjt:  MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0844.93Show/hide
Query:  VVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL
        + GV       +  S  FA   LPVRYLG+PLL+ ++ +SD   L+ +I  +I  W+AR LSF GRLQL
Subjt:  VVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTAATCTGGGAAAGAGCTCTATGTTTGTGGTGGGGGTTGACAGAGAGGGTGCTACTGTGTTGGCAGATAGTACGGGGTTTGCGCTGAGTACTCTTCCTGTTCG
TTACCTGGGTATTCCCTTACTCTCTGGTAGGCTACGTTCTTCAGATTGTATGTCTCTCATCCATCGTATTACTAGTCAGATTTGGTATTGGTCGGCTAGAGTTTTGTCCT
TCGTTGGGAGACTTCAGCTGAGGGGCAAAGAGGATGGGAAAGGGGTGCAAAGCTTGCTTGGGTGGAGGTGTGTCGCCCATTTGATTAGAGAAAAACCCCTTACCTCGGAT
GCCAAGTCCAAAATGTACCACGCGGCAAGGACAGAACAAGCTACGCGAGAAGACAGCTCCCTCGCTTACTCCTCGGCGAACGAGGCTACGCGGCAAGAGAAACAGCCAGG
CGAAGAGGAATTGAGAAAACAGAACGCGGAGAAACCAAAACCAAAACGCAGAGGAAAACTTACCTCGCGAACAAGGGATCTTGCGAAGAAGGACAACGCGGGAAAGGCAA
CCAGGCGAAACAACCAGCTCGCGAACAACGGCAGGCGGCGGGGAGTTCGCGGACAACTTCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTCTTCACCAAAGGACG
AATCAGACCGCGAGGAAAATACTTGCGAACACTCTTAGCTCTGCGGACTGTCTAAGCTCGCGGACTCCACACACTTCGCGAGCTACTCTACCTCGCGAACAATTCCACAC
GCGGACAACTGAACCACGCGGGAAAAGCTTACTTCATGGCAAGGAAAGCTTAAAACGAGCGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCACGCA
CGGCGGCGAAACACGAACTACCCTTCACACGAACAACTCCAAAACGCAACAACTACACATCCAAAACTTCTTTCGGCGGCAAGAATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGCTAATCTGGGAAAGAGCTCTATGTTTGTGGTGGGGGTTGACAGAGAGGGTGCTACTGTGTTGGCAGATAGTACGGGGTTTGCGCTGAGTACTCTTCCTGTTCG
TTACCTGGGTATTCCCTTACTCTCTGGTAGGCTACGTTCTTCAGATTGTATGTCTCTCATCCATCGTATTACTAGTCAGATTTGGTATTGGTCGGCTAGAGTTTTGTCCT
TCGTTGGGAGACTTCAGCTGAGGGGCAAAGAGGATGGGAAAGGGGTGCAAAGCTTGCTTGGGTGGAGGTGTGTCGCCCATTTGATTAGAGAAAAACCCCTTACCTCGGAT
GCCAAGTCCAAAATGTACCACGCGGCAAGGACAGAACAAGCTACGCGAGAAGACAGCTCCCTCGCTTACTCCTCGGCGAACGAGGCTACGCGGCAAGAGAAACAGCCAGG
CGAAGAGGAATTGAGAAAACAGAACGCGGAGAAACCAAAACCAAAACGCAGAGGAAAACTTACCTCGCGAACAAGGGATCTTGCGAAGAAGGACAACGCGGGAAAGGCAA
CCAGGCGAAACAACCAGCTCGCGAACAACGGCAGGCGGCGGGGAGTTCGCGGACAACTTCTCAGCTTCGCGAGCTACTCCTTAGCTCGCGAACTTCTTCACCAAAGGACG
AATCAGACCGCGAGGAAAATACTTGCGAACACTCTTAGCTCTGCGGACTGTCTAAGCTCGCGGACTCCACACACTTCGCGAGCTACTCTACCTCGCGAACAATTCCACAC
GCGGACAACTGAACCACGCGGGAAAAGCTTACTTCATGGCAAGGAAAGCTTAAAACGAGCGAAAAGAGGAAGTTTTGGACGGAAAGCTTACCGGAGAAGAAAACCACGCA
CGGCGGCGAAACACGAACTACCCTTCACACGAACAACTCCAAAACGCAACAACTACACATCCAAAACTTCTTTCGGCGGCAAGAATGGCTGA
Protein sequenceShow/hide protein sequence
MVANLGKSSMFVVGVDREGATVLADSTGFALSTLPVRYLGIPLLSGRLRSSDCMSLIHRITSQIWYWSARVLSFVGRLQLRGKEDGKGVQSLLGWRCVAHLIREKPLTSD
AKSKMYHAARTEQATREDSSLAYSSANEATRQEKQPGEEELRKQNAEKPKPKRRGKLTSRTRDLAKKDNAGKATRRNNQLANNGRRRGVRGQLLSFASYSLARELLHQRT
NQTARKILANTLSSADCLSSRTPHTSRATLPREQFHTRTTEPRGKSLLHGKESLKRAKRGSFGRKAYRRRKPRTAAKHELPFTRTTPKRNNYTSKTSFGGKNG