; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006498 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006498
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description60S ribosomal protein L18a-like protein
Genome locationchr12:6088996..6092572
RNA-Seq ExpressionPI0006498
SyntenyPI0006498
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044804 - AT1G29970-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147407.1 60S ribosomal protein L18a-like protein [Cucumis sativus]2.2e-8195.6Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGD   QYHYGTFQGVANYYTSPPQPQPQPQ QSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

XP_008444018.1 PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo]1.2e-8296.86Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSVVFGD   QYHYGTFQGVANYYTSPPQPQPQPQ QSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

XP_022140257.1 60S ribosomal protein L18a-like protein [Momordica charantia]4.7e-7184.28Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+S V GD   QYHYGTFQGVANYY S  QPQPQPQ  SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

XP_022927552.1 60S ribosomal protein L18a-like protein [Cucurbita moschata]5.2e-7083.02Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGD   QYHYGTFQGVANYY+S P+PQPQP  QSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE+W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

XP_038895475.1 60S ribosomal protein L18a-like protein [Benincasa hispida]1.2e-7187.42Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGD   QYHYGTFQGVANYY+S PQ QP    QS VGFPQPV P  VSGH PCYHGHLGYQAVPVQGYAI+E RPF+EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

TrEMBL top hitse value%identityAlignment
A0A0A0M051 Uncharacterized protein1.1e-8195.6Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKS+VVFGD   QYHYGTFQGVANYYTSPPQPQPQPQ QSVVGFPQPVA PVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

A0A1S3B9D9 60S ribosomal protein L18a-like protein5.7e-8396.86Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSSVVFGD   QYHYGTFQGVANYYTSPPQPQPQPQ QSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVE W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

A0A6J1CGC1 60S ribosomal protein L18a-like protein2.3e-7184.28Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGK+S V GD   QYHYGTFQGVANYY S  QPQPQPQ  SVVGFPQPVAPP VSG  P YHGHLGYQAVPVQGYAI+EGRP+QEARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLF+IGFFLGGIPWYVGAFIVLFVRVDYREKPGYVAC IASVLA++AITFG+T G E W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

A0A6J1EHH7 60S ribosomal protein L18a-like protein2.5e-7083.02Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MSGDGKSS VFGD   QYHYGTFQGVANYY+S P+PQPQP  QSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE+W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

A0A6J1KIR0 60S ribosomal protein L18a-like protein1.2e-6983.02Show/hide
Query:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW
        MS DGKSS VFGD   QYHYGTFQGVANYY+S PQPQPQP  QSVVGFP  VAPP      PCYHGHL YQAVPVQGYAI+EGRPF EARLPCCGIGMGW
Subjt:  MSGDGKSSVVFGD---QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGW

Query:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FLFMIGFFLGGIPWYVGAF+VLFVRVDYREKPGY+ACAIASVLAV+AITFG++ GVE+W
Subjt:  FLFMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

SwissProt top hitse value%identityAlignment
Q8L9S1 60S ribosomal protein L18a-like protein3.4e-3251.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  + +W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

Arabidopsis top hitse value%identityAlignment
AT1G17080.1 Ribosomal protein L18ae family3.1e-4157.82Show/hide
Query:  GDQYH-YGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIP
        G+Q+H YGTFQGV+NY      P PQ  +  V GFPQP APP V      Y+ H GYQ VPV G  + EGRP ++ RLPCCGIG+GWFLF++GFFLG IP
Subjt:  GDQYH-YGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIP

Query:  WYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        WYVG FI++F  R+DYREKPGY+AC IA++LA IA+  G++ G + W
Subjt:  WYVGAFIVLF-VRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

AT1G29970.1 60S ribosomal protein L18A-12.4e-3351.05Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  + +W
Subjt:  GAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

AT1G29970.2 60S ribosomal protein L18A-12.3e-2853.23Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFLF++GF  GGIPWY+
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYV

Query:  GAFIVLFVRVDYREKPGYVACAIA
        GAFIVL   VD+REK GYVAC+IA
Subjt:  GAFIVLFVRVDYREKPGYVACAIA

AT1G29970.3 60S ribosomal protein L18A-13.4e-2739.46Show/hide
Query:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------
        QY+YGTFQGVAN+ T  P PQ       +  FP   A   + GH    +   G+  V V  Y ++E RP  E  LPCCG+GMGWFL              
Subjt:  QYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFL--------------

Query:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
                                    F++GF  GGIPWY+GAFIVL   VD+REK GYVAC+IASV+ +IA+  G+T  + +W
Subjt:  ----------------------------FMIGFFLGGIPWYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW

AT1G53560.1 Ribosomal protein L18ae family5.7e-3551.77Show/hide
Query:  YGTFQGVANYYTSPPQPQPQPQT-QSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGA
        YGTFQGV  Y   PP   P P +   V+G PQP  PP    H    H ++  +   V GY + +GRP ++ RLPCCG+G+GWFLF+IGF LG IPWYVG 
Subjt:  YGTFQGVANYYTSPPQPQPQPQT-QSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIPWYVGA

Query:  FIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW
        FI++  R+D REKPGYVAC IA+V+A I I FG+  G  +W
Subjt:  FIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGGCGACGGGAAAAGCAGCGTGGTATTCGGCGATCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTATACTTCTCCTCCACAACCGCAACCGCAGCC
ACAGACCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCCACCCGTTGTTTCTGGTCACCAACCATGTTACCATGGACATTTGGGTTACCAAGCCGTTCCTGTTCAAG
GCTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTTATGATTGGCTTCTTTCTTGGTGGCATTCCC
TGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGCTTCAGTTCTTGCTGTCATTGCTATAACATT
TGGTATCACCAACGGAGTTGAGCTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
GAAATGGGTTCCCAATTACGCCCGAGCTGAGTACAAACTGCCAGCTGTACAACTTCAATTCACCAAAATCACCAAACATCACCGCCTTATTAGAAACCGGAGACATTCAT
TCTCCATTCCGCCAAGCTCCGTCCACCGTCGATCCCAATTTTTCCGGCGAAATCGCAGAAGAAGAGAACTGCGACGACGAGACCTTCGCCGTCGTCTTGATATTCAAGAA
ACCTTCTCTGATTCTTCTTCTGCAAACAATATGAGTGGCGACGGGAAAAGCAGCGTGGTATTCGGCGATCAATACCATTACGGTACGTTTCAGGGTGTTGCGAACTATTA
TACTTCTCCTCCACAACCGCAACCGCAGCCACAGACCCAATCTGTCGTCGGTTTCCCTCAGCCGGTTGCGCCACCCGTTGTTTCTGGTCACCAACCATGTTACCATGGAC
ATTTGGGTTACCAAGCCGTTCCTGTTCAAGGCTATGCTATTCTTGAGGGAAGACCTTTTCAAGAAGCCCGTCTTCCTTGCTGTGGCATTGGCATGGGCTGGTTCTTGTTT
ATGATTGGCTTCTTTCTTGGTGGCATTCCCTGGTATGTTGGAGCTTTTATTGTACTCTTTGTACGGGTCGATTACCGAGAAAAGCCTGGATATGTTGCATGTGCAATTGC
TTCAGTTCTTGCTGTCATTGCTATAACATTTGGTATCACCAACGGAGTTGAGCTCTGGTGAAGGAAACATATGAAGAACGGTCTGGTCTGGTCGATACCGATGTCACCCT
CCCCCTGCATCGACGAAAACAACTGGTGTGGTACTGTAATTAGCTTTGAAATTGTTATTCTTTTCAGTCTATATTTATCAACTTATTGGTTTCTTTTACCATATACATAT
TGGAATTTTCCTGACTTGCCAAATTTGAAATGAAATGTTAATAGATTGAAGACAAAATTATTAGCTTTATTGGAAGGGTTTTTCTTTTTAATTATAATTATAAATTCCGG
GAACAGTTTGCACGTC
Protein sequenceShow/hide protein sequence
MSGDGKSSVVFGDQYHYGTFQGVANYYTSPPQPQPQPQTQSVVGFPQPVAPPVVSGHQPCYHGHLGYQAVPVQGYAILEGRPFQEARLPCCGIGMGWFLFMIGFFLGGIP
WYVGAFIVLFVRVDYREKPGYVACAIASVLAVIAITFGITNGVELW