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PI0006501 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006501
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr08:4658754..4663700
RNA-Seq ExpressionPI0006501
SyntenyPI0006501
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004518 - nuclease activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046544.1 reverse transcriptase [Cucumis melo var. makuwa]3.7e-5270.51Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV
        MS++ P GKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV   ++G PI+EL+TRVD LE     GRTVNYERGD+S G VAHIEERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAI
         ELDSSQK+++EMINGMSEDF A LDVVRNEIADV+AR++L MRAMANQAP GGAI
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAI

KAA0065910.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]7.4e-5361.7Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV
        MS+A P GK+  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK D IDAV   ++GLPI+ELL RV+TLEA    GRT+NYERG++S GF AH+EERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF   LDVVRN+IADV+AR+NLMMRAMANQAP GG I  +++K+        K     R AK L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

KAA0067252.1 uncharacterized protein E6C27_scaffold418G00690 [Cucumis melo var. makuwa]2.1e-5262.77Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV
        M ++ P GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK D IDAV   ++GLPI+ELL RVD LE    A RTVNYERGD+S GF AH++ERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF   LDVVRNEIADV+AR+NL MRAMANQAP GGAI  +R+K+S       K     R AK+L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

TYK03099.1 reverse transcriptase [Cucumis melo var. makuwa]1.3e-5263.3Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV
        MS++ PLGKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV   ++G PI+EL+TRVD LE     GRTVNYERGD+S G VAHIEERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF A LDVVRNEIADV+AR++L MRAMANQAP GGAI  +R+K+        K     R AK L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

TYK27261.1 uncharacterized protein E5676_scaffold244G00280 [Cucumis melo var. makuwa]2.8e-5268.48Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEAKAG--RTVNYERGDNSMGFVAHIEERV
        MS A P G A  DRL E+EEQMLYL E+PD++R+LE R+EE+SEKA  IDAV   ++GLPI+ELL RVDTLEA     RTVNYERGD+S GFVAH+EERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEAKAG--RTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSR
        GELDSSQK+++++INGMSEDF   LDVVRNEIADV+AR+NL MRAMANQAP GGAI  +R+K+ +
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSR

TrEMBL top hitse value%identityAlignment
A0A5A7TU11 Reverse transcriptase1.8e-5270.51Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV
        MS++ P GKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV   ++G PI+EL+TRVD LE     GRTVNYERGD+S G VAHIEERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAI
         ELDSSQK+++EMINGMSEDF A LDVVRNEIADV+AR++L MRAMANQAP GGAI
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAI

A0A5A7VFC8 Senescence-specific cysteine protease sag393.6e-5361.7Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV
        MS+A P GK+  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK D IDAV   ++GLPI+ELL RV+TLEA    GRT+NYERG++S GF AH+EERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEA--KAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF   LDVVRN+IADV+AR+NLMMRAMANQAP GG I  +++K+        K     R AK L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

A0A5A7VFV0 Retrotrans_gag domain-containing protein1.0e-5262.77Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV
        M ++ P GKA  DRLVEIEEQMLYL+E+PD++R+LE R++E+SEK D IDAV   ++GLPI+ELL RVD LE    A RTVNYERGD+S GF AH++ERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF   LDVVRNEIADV+AR+NL MRAMANQAP GGAI  +R+K+S       K     R AK+L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

A0A5D3BYE6 Reverse transcriptase6.1e-5363.3Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV
        MS++ PLGKA  DRLVE+EEQMLYL+E+PD++R+LE R+EE+SEK + IDAV   ++G PI+EL+TRVD LE     GRTVNYERGD+S G VAHIEERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLE--AKAGRTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF
         ELDSSQK+++EMINGMSEDF A LDVVRNEIADV+AR++L MRAMANQAP GGAI  +R+K+        K     R AK L    F
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSRSFHDGRKESMSVRQAKNLPKAYF

A0A5D3DU93 Uncharacterized protein1.4e-5268.48Show/hide
Query:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEAKAG--RTVNYERGDNSMGFVAHIEERV
        MS A P G A  DRL E+EEQMLYL E+PD++R+LE R+EE+SEKA  IDAV   ++GLPI+ELL RVDTLEA     RTVNYERGD+S GFVAH+EERV
Subjt:  MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEAKAG--RTVNYERGDNSMGFVAHIEERV

Query:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSR
        GELDSSQK+++++INGMSEDF   LDVVRNEIADV+AR+NL MRAMANQAP GGAI  +R+K+ +
Subjt:  GELDSSQKSIVEMINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQ-ARLKMSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAGCGAAACCATTGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTATTGGAAATTCCAGACACCGTTCGCTTCTTGGAAGG
TCGGATTGAAGAAGTTTCCGAGAAAGCTGATGCTATTGATGCGGTGACCAGTCTCCTCGACGGATTACCTATAAAAGAGTTGTTGACAAGAGTTGACACTCTAGAGGCAA
AGGCTGGAAGAACTGTTAACTACGAGCGTGGGGACAATTCAATGGGCTTTGTTGCCCACATAGAAGAACGGGTTGGCGAGCTAGATAGCTCTCAAAAGTCGATTGTTGAG
ATGATAAACGGCATGTCAGAGGATTTTTGTGCCGCTCTTGACGTCGTCAGGAATGAGATCGCAGACGTGAGCGCGAGGGTGAACCTCATGATGCGAGCCATGGCAAACCA
AGCTCCAATTGGAGGAGCTATACAAGCGCGTCTGAAGATGTCCAGAAGCTTCCATGACGGTCGGAAAGAATCCATGTCGGTTCGGCAAGCTAAGAACCTCCCAAAGGCTT
ACTTTGGTGTAACCTTGAGCAAGTTCACCTTAGTGCCGCACGTTGAGTTACTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAGCGAAACCATTGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTATTGGAAATTCCAGACACCGTTCGCTTCTTGGAAGG
TCGGATTGAAGAAGTTTCCGAGAAAGCTGATGCTATTGATGCGGTGACCAGTCTCCTCGACGGATTACCTATAAAAGAGTTGTTGACAAGAGTTGACACTCTAGAGGCAA
AGGCTGGAAGAACTGTTAACTACGAGCGTGGGGACAATTCAATGGGCTTTGTTGCCCACATAGAAGAACGGGTTGGCGAGCTAGATAGCTCTCAAAAGTCGATTGTTGAG
ATGATAAACGGCATGTCAGAGGATTTTTGTGCCGCTCTTGACGTCGTCAGGAATGAGATCGCAGACGTGAGCGCGAGGGTGAACCTCATGATGCGAGCCATGGCAAACCA
AGCTCCAATTGGAGGAGCTATACAAGCGCGTCTGAAGATGTCCAGAAGCTTCCATGACGGTCGGAAAGAATCCATGTCGGTTCGGCAAGCTAAGAACCTCCCAAAGGCTT
ACTTTGGTGTAACCTTGAGCAAGTTCACCTTAGTGCCGCACGTTGAGTTACTTTGA
Protein sequenceShow/hide protein sequence
MSTAKPLGKAHADRLVEIEEQMLYLLEIPDTVRFLEGRIEEVSEKADAIDAVTSLLDGLPIKELLTRVDTLEAKAGRTVNYERGDNSMGFVAHIEERVGELDSSQKSIVE
MINGMSEDFCAALDVVRNEIADVSARVNLMMRAMANQAPIGGAIQARLKMSRSFHDGRKESMSVRQAKNLPKAYFGVTLSKFTLVPHVELL