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PI0006525 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006525
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:13216114..13216317
RNA-Seq ExpressionPI0006525
SyntenyPI0006525
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043564.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLINREMTN+E+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLINREMTN+E+ DDLDEGDST+ATTGGD+I+YIE SNEWS+WRDQLA T+FSDWEL+ Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

KAA0063753.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.9e-2380.6Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLINREMTN+E+ DDLDE DST+ATTGGD+I+YIE SNEWS+WRDQLA T+FSDWEL +Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

TYK08389.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.9e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLI REMTNNE+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

XP_008441953.1 PREDICTED: uncharacterized protein LOC103485952 [Cucumis melo]5.9e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLI REMTNNE+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A1S3B4J8 uncharacterized protein LOC1034859522.9e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLI REMTNNE+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

A0A5A7U0J9 Putative nuclease HARBI12.9e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLI REMTNNE+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

A0A5A7V6M3 Putative nuclease HARBI12.9e-2380.6Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLINREMTN+E+ DDLDE DST+ATTGGD+I+YIE SNEWS+WRDQLA T+FSDWEL +Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

A0A5D3CDG6 Putative nuclease HARBI12.9e-2382.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLI REMTNNE+ DDLDEGDST+ATTGGD+I+YIE SNEWS+ RDQLA T+FSDWELR+Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

A0A5D3DG22 Retrotransposon protein7.5e-2482.09Show/hide
Query:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ
        MACCLLHNLINREMTN+E+ DDLDEGDST+ATTGGD+I+YIE SNEWS+WRDQLA T+FSDWEL+ Q
Subjt:  MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGTTGTCTTCTACATAATCTTATCAATAGAGAGATGACTAACAATGAGATGAACGACGATTTGGACGAGGGTGATTCGACCCACGCTACAACGGGAGGTGACGA
TATTAGTTACATTGAGACCTCAAATGAATGGAGTCAATGGAGGGATCAATTGGCTGAGACGATCTTCAGTGATTGGGAGTTACGTAACCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGTTGTCTTCTACATAATCTTATCAATAGAGAGATGACTAACAATGAGATGAACGACGATTTGGACGAGGGTGATTCGACCCACGCTACAACGGGAGGTGACGA
TATTAGTTACATTGAGACCTCAAATGAATGGAGTCAATGGAGGGATCAATTGGCTGAGACGATCTTCAGTGATTGGGAGTTACGTAACCAGTAG
Protein sequenceShow/hide protein sequence
MACCLLHNLINREMTNNEMNDDLDEGDSTHATTGGDDISYIETSNEWSQWRDQLAETIFSDWELRNQ