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PI0006530 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006530
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein Ycf2-like
Genome locationchr08:3129076..3130450
RNA-Seq ExpressionPI0006530
SyntenyPI0006530
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035989.1 protein Ycf2-like [Cucumis melo var. makuwa]6.1e-2531.8Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA   EV M YF PF+E  K ILKE E+ELRK ++ + + ++SLNRGMPSTS +D +T+++++IE  Q+     +  +LE+++ +E  +N + E L   M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN
          +++ I++    +S       +M A  F++ L+ +E DQEE                 K +  +D                          E+TDE IN
Subjt:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN

Query:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
         +I SIDE+ IY+ +++ +++R   +    L +T +++  VQ ++G  K     A++  K+  NDRLSN+ EN  A  +ILKH
Subjt:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]5.1e-2430.58Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF+E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E LV  M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------
          +M+  K    +G  +   ++D ++ D++ +D+E                D E+K+ K                 Q  V                    
Subjt:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------

Query:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+TDE IN +I SIDE+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ +N  A  ++LKH
Subjt:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]6.9e-2131.16Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E L +  
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKY------------IKNPPIGTSSNTMYMDAIDFD----KKLNDIEKDQE---------------------EKEEKQQDV-EDTDETINNVILSID
        R   ++            +++  + TS+ T+     D +    K+L D  + +                      +KE  Q    E+TDE IN +I SID
Subjt:  RTMMKY------------IKNPPIGTSSNTMYMDAIDFD----KKLNDIEKDQE---------------------EKEEKQQDV-EDTDETINNVILSID

Query:  EAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ EN  A  ++LKH
Subjt:  EAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

TYK29864.1 protein Ycf2-like [Cucumis melo var. makuwa]3.3e-2330.58Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E LV  M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------
          +M+  K    +G  +   ++D ++ D++ +D+E                D E+K+ K                 Q  V                    
Subjt:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------

Query:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+TDE IN +I SIDE+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ +N  A  ++LKH
Subjt:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]6.1e-2531.8Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA   EV M YF PF+E  K ILKE E+ELRK ++ + + ++SLNRGMPSTS +D +T+++++IE  Q+     +  +LE+++ +E  +N + E L   M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN
          +++ I++    +S       +M A  F++ L+ +E DQEE                 K +  +D                          E+TDE IN
Subjt:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN

Query:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
         +I SIDE+ IY+ +++ +++R   +    L +T +++  VQ ++G  K     A++  K+  NDRLSN+ EN  A  +ILKH
Subjt:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

TrEMBL top hitse value%identityAlignment
A0A5A7T3K3 Protein Ycf2-like2.9e-2531.8Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA   EV M YF PF+E  K ILKE E+ELRK ++ + + ++SLNRGMPSTS +D +T+++++IE  Q+     +  +LE+++ +E  +N + E L   M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN
          +++ I++    +S       +M A  F++ L+ +E DQEE                 K +  +D                          E+TDE IN
Subjt:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN

Query:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
         +I SIDE+ IY+ +++ +++R   +    L +T +++  VQ ++G  K     A++  K+  NDRLSN+ EN  A  +ILKH
Subjt:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

A0A5A7U047 Protein Ycf2-like2.5e-2430.58Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF+E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E LV  M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------
          +M+  K    +G  +   ++D ++ D++ +D+E                D E+K+ K                 Q  V                    
Subjt:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------

Query:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+TDE IN +I SIDE+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ +N  A  ++LKH
Subjt:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

A0A5D3CEX9 Protein Ycf2-like3.4e-2131.16Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E L +  
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKY------------IKNPPIGTSSNTMYMDAIDFD----KKLNDIEKDQE---------------------EKEEKQQDV-EDTDETINNVILSID
        R   ++            +++  + TS+ T+     D +    K+L D  + +                      +KE  Q    E+TDE IN +I SID
Subjt:  RTMMKY------------IKNPPIGTSSNTMYMDAIDFD----KKLNDIEKDQE---------------------EKEEKQQDV-EDTDETINNVILSID

Query:  EAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ EN  A  ++LKH
Subjt:  EAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

A0A5D3E1W7 Protein Ycf2-like1.6e-2330.58Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA  +EV M +F PF E  K ILKE E+ELRKN++ + +  +SLNRGMPSTS+++ + +++E+IE  Q+     +  +LE+++ +E  MN + E LV  M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------
          +M+  K    +G  +   ++D ++ D++ +D+E                D E+K+ K                 Q  V                    
Subjt:  RTMMKYIKNPP-IGTSSNTMYMDAIDFDKKLNDIE---------------KDQEEKEEK-----------------QQDV--------------------

Query:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
        E+TDE IN +I SIDE+ IY+ +++ +  R   +    L +T +++  VQP++G  K     A++  K+  NDR+SN+ +N  A  ++LKH
Subjt:  EDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

A0A5D3E3E8 Protein Ycf2-like2.9e-2531.8Show/hide
Query:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM
        LA   EV M YF PF+E  K ILKE E+ELRK ++ + + ++SLNRGMPSTS +D +T+++++IE  Q+     +  +LE+++ +E  +N + E L   M
Subjt:  LAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTM

Query:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN
          +++ I++    +S       +M A  F++ L+ +E DQEE                 K +  +D                          E+TDE IN
Subjt:  RTMMKYIKNPPIGTSSNT---MYMDAIDFDKKLNDIEKDQEE-----------------KEEKQQD-------------------------VEDTDETIN

Query:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH
         +I SIDE+ IY+ +++ +++R   +    L +T +++  VQ ++G  K     A++  K+  NDRLSN+ EN  A  +ILKH
Subjt:  NVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLDMNDRLSNIDENNHATMIILKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCTCTAGCAATGTTGGAGGAAGTAAACATGTCATATTTTACACCATTCCTTGAAGATGGGAAACGAATCTTGAAAGAGGTCGAAGAAGAGCTAAGAAAGAATCA
ACATGTTGAGAGAGTAGTTCAACTCTCATTAAATAGAGGCATGCCCTCTACGTCCCAAGTTGATGGAATCACTCAAGTGCTAGAAAGAATTGAAAGATGCCAAGAGTTAA
CAAACAAAAGAATGCATGAGATGCTTGAGTACATAGAGATGATTGAAGACAATATGAACAAGAAAATAGAAAATTTGGTGAGCACGATGAGAACAATGATGAAATATATC
AAGAATCCACCAATTGGAACTTCATCAAATACAATGTATATGGATGCAATAGATTTCGATAAGAAACTAAACGATATAGAGAAAGATCAAGAGGAAAAAGAAGAAAAACA
ACAGGATGTCGAAGACACAGACGAGACAATAAATAATGTTATACTATCAATAGATGAAGCAAAAATATATGAAAGCCTCGAAAGATCGAAAAATGAAAGAATGGACAAAA
AGATTATTGGTCCCTTGCAAACAACAAAACAAATTATGGACAAAGTACAACCATCATGGGGCTCAAGCAAAAGAGGCGTACCAAAAGCTGAGGTAAATAGGAAGTTGGAC
ATGAACGATAGGTTGTCCAACATTGATGAAAATAATCATGCAACGATGATCATACTAAAACACGATGAAAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTCTCTAGCAATGTTGGAGGAAGTAAACATGTCATATTTTACACCATTCCTTGAAGATGGGAAACGAATCTTGAAAGAGGTCGAAGAAGAGCTAAGAAAGAATCA
ACATGTTGAGAGAGTAGTTCAACTCTCATTAAATAGAGGCATGCCCTCTACGTCCCAAGTTGATGGAATCACTCAAGTGCTAGAAAGAATTGAAAGATGCCAAGAGTTAA
CAAACAAAAGAATGCATGAGATGCTTGAGTACATAGAGATGATTGAAGACAATATGAACAAGAAAATAGAAAATTTGGTGAGCACGATGAGAACAATGATGAAATATATC
AAGAATCCACCAATTGGAACTTCATCAAATACAATGTATATGGATGCAATAGATTTCGATAAGAAACTAAACGATATAGAGAAAGATCAAGAGGAAAAAGAAGAAAAACA
ACAGGATGTCGAAGACACAGACGAGACAATAAATAATGTTATACTATCAATAGATGAAGCAAAAATATATGAAAGCCTCGAAAGATCGAAAAATGAAAGAATGGACAAAA
AGATTATTGGTCCCTTGCAAACAACAAAACAAATTATGGACAAAGTACAACCATCATGGGGCTCAAGCAAAAGAGGCGTACCAAAAGCTGAGGTAAATAGGAAGTTGGAC
ATGAACGATAGGTTGTCCAACATTGATGAAAATAATCATGCAACGATGATCATACTAAAACACGATGAAAGGAAATGA
Protein sequenceShow/hide protein sequence
MSSLAMLEEVNMSYFTPFLEDGKRILKEVEEELRKNQHVERVVQLSLNRGMPSTSQVDGITQVLERIERCQELTNKRMHEMLEYIEMIEDNMNKKIENLVSTMRTMMKYI
KNPPIGTSSNTMYMDAIDFDKKLNDIEKDQEEKEEKQQDVEDTDETINNVILSIDEAKIYESLERSKNERMDKKIIGPLQTTKQIMDKVQPSWGSSKRGVPKAEVNRKLD
MNDRLSNIDENNHATMIILKHDERK