; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006576 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006576
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr01:4380990..4381927
RNA-Seq ExpressionPI0006576
SyntenyPI0006576
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK08129.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.4e-12293.57Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+TLPSPTILSPPLKLPSSV K CCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAETDLAPEIDGFNALLK LV HNLG+LA+ESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EEGATAI IH
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

XP_008451190.1 PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis melo]8.4e-12393.98Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+TLPSPTILSPPLKLPSSV K CCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAETDLAPEIDGFNALLKALV HNLG+LA+ESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EEGATAI IH
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

XP_022952712.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucurbita moschata]2.2e-10784.34Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T PS TILSPP  L  S GK   L+LGR  GYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVR E WYKPQVSLYADI+SVLASNGLFE++QII SY KAETDLAPEI+GFN LLKALVS+NLGELA+ESYYLMKEVGCEPDK 
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLES  E+VDLRTVK+DAQ+LYGESLEFLEEE+E AT I  H
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

XP_031744771.1 protein THYLAKOID ASSEMBLY 8-like, chloroplastic [Cucumis sativus]4.3e-11992.34Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSVG ACCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAE DLAPEIDGFNALLKALVSHNLGELA+ESYYLMK+VGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFI
        SFR+VIKGLESKGEAVDLRTVKQDAQ+LYGESLEFLEEEEEGATA  I
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFI

XP_038888189.1 protein THYLAKOID ASSEMBLY 8, chloroplastic-like [Benincasa hispida]9.0e-11790.36Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+  PSPTILSP  KL SS G+A CL LGRA GYR+VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII VLASNGLFER+QII SY+KAETDLAPEIDGFNALLKALVSHNLGELA+ESYYLMKE+GCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEE A AI  H
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

TrEMBL top hitse value%identityAlignment
A0A0A0K6A9 Uncharacterized protein2.1e-11992.34Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T  SPTI SP LK PSSVG ACCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVR EHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAE DLAPEIDGFNALLKALVSHNLGELA+ESYYLMK+VGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFI
        SFR+VIKGLESKGEAVDLRTVKQDAQ+LYGESLEFLEEEEEGATA  I
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFI

A0A1S3BRZ8 pentatricopeptide repeat-containing protein At3g46870-like4.1e-12393.98Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+TLPSPTILSPPLKLPSSV K CCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAETDLAPEIDGFNALLKALV HNLG+LA+ESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EEGATAI IH
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

A0A5A7UZI6 Pentatricopeptide repeat-containing protein4.1e-12393.98Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+TLPSPTILSPPLKLPSSV K CCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAETDLAPEIDGFNALLKALV HNLG+LA+ESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EEGATAI IH
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

A0A5D3CCT4 Pentatricopeptide repeat-containing protein1.2e-12293.57Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL+TLPSPTILSPPLKLPSSV K CCLQLGRA GY RVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADII+VLASNGLFER+QIILSYMKAETDLAPEIDGFNALLK LV HNLG+LA+ESYYLMKEVGCEP+KA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLE KGEAVDLRTVKQDAQKLYGESLEFLEE EEGATAI IH
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

A0A6J1HX85 protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.1e-10784.34Show/hide
Query:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR
        MSFL T PS TILSPP  L  S GK   L+LGR  GYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR KKDLQQLDRVYDSKIRRLLKFDM+AVLR
Subjt:  MSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLR

Query:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA
        ELLRQNECSLALKVFEDVR E WYKPQVSLYADI+SVLASNGLFE++QII SY+KAETDLAPEI+GFN LLKALVS+NLGELA+ESYYLMKEVGCEPDKA
Subjt:  ELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKA

Query:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH
        SFR+VIKGLES  E+VDLR VK+DAQ+LYGESLEFLEEE+E AT I  H
Subjt:  SFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEEEGATAIFIH

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351307.1e-0830.36Show/hide
Query:  LALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVI---
        ++ K++ ++R+ H  KP +  Y  +++  A  GL E+ + I   ++ E  L P++  +NAL+++         A E + LM+ +GCEPD+AS+ +++   
Subjt:  LALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVI---

Query:  --KGLESKGEAV
           GL S  EAV
Subjt:  --KGLESKGEAV

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.2e-1533.14Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAE

Query:  TDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLY
          L  +   F  L++  + + L   A+  Y  M+E    P    FRV++KGL    E  +   VK D  +L+
Subjt:  TDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLY

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic1.7e-1738.98Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIISVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI++ L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIISVLASNG

Query:  LFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-----CEPDKASFRVVIKGLESKGE
         F+ I  ++  +    D   +      L++A+V     E  V  Y LM+E G      E D+    V+ KGL   GE
Subjt:  LFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-----CEPDKASFRVVIKGLESKGE

Q9SCP4 Pentatricopeptide repeat-containing protein At3g531702.1e-0726.85Show/hide
Query:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAET
        ++  + +  + RT   ++ ++R  +S K   L    +L  L E +++N    ALK+F  +R +HWY+P+   Y  +  VL +    ++  ++   M +E 
Subjt:  IEAIQAVQSLKRTKKDLQQLDRVYDS-KIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAET

Query:  DLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-CEPDKASFRVVI
         L P ID + +L+       L + A  +   MK V  C+PD  +F V+I
Subjt:  DLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-CEPDKASFRVVI

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic1.2e-1833.16Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERI
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++ + WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERI

Query:  QIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEE
          +   MK E +L P+   +  +++  +       A+  Y  M +    P++  FRV++KGL      +    VK+D ++L+ E   +   EE
Subjt:  QIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEE

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein8.6e-1733.14Show/hide
Query:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAE
        +S E + A + LKR +    +LDR   S + RLLK D+++VL E  RQN+  L +K++E VR E WY+P +  Y D++ +LA N   +  + +   +K E
Subjt:  LSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAE

Query:  TDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLY
          L  +   F  L++  + + L   A+  Y  M+E    P    FRV++KGL    E  +   VK D  +L+
Subjt:  TDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLY

AT2G35130.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.1e-0930.36Show/hide
Query:  LALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVI---
        ++ K++ ++R+ H  KP +  Y  +++  A  GL E+ + I   ++ E  L P++  +NAL+++         A E + LM+ +GCEPD+AS+ +++   
Subjt:  LALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVI---

Query:  --KGLESKGEAV
           GL S  EAV
Subjt:  --KGLESKGEAV

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.2e-1838.98Show/hide
Query:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIISVLASNG
        G  +NR PL KGR LS EAIQ++QSLKR  +    L       +RRL+K D+++VLRELLRQ+ C+LA+ V   +R E  Y P  + LYADI++ L  N 
Subjt:  GGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKP-QVSLYADIISVLASNG

Query:  LFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-----CEPDKASFRVVIKGLESKGE
         F+ I  ++  +    D   +      L++A+V     E  V  Y LM+E G      E D+    V+ KGL   GE
Subjt:  LFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVG-----CEPDKASFRVVIKGLESKGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein8.4e-2033.16Show/hide
Query:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERI
        R PL +G+ L   EA+  +  LKR K+D ++LD+   + + RLLK DMLAV+ EL RQ E +LA+K+FE ++ + WY+P V +Y D+I  LA +   +  
Subjt:  RKPLQKGRNL-SIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERI

Query:  QIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEE
          +   MK E +L P+   +  +++  +       A+  Y  M +    P++  FRV++KGL      +    VK+D ++L+ E   +   EE
Subjt:  QIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQDAQKLYGESLEFLEEEE

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain7.0e-5956.22Show/hide
Query:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWY
        + MR  S+NRKPLQ+GR LSIEAIQAVQ+LKR               T      LDRV  SK RRLLKFDM+AVLRELLRQNECSLALKVFE++R E+WY
Subjt:  VTMRGGSENRKPLQKGRNLSIEAIQAVQSLKR---------------TKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECSLALKVFEDVRNEHWY

Query:  KPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQD
        KPQV +Y D+I+V+A N L E +  + S MK+E  L  EI+ FN LL  L++H L +L ++ Y  M+ +G EPD+ASFRV++ GLES GE      V+QD
Subjt:  KPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLRTVKQD

Query:  AQKLYGESLEFLEEEEE
        A + YGESLEF+EE+EE
Subjt:  AQKLYGESLEFLEEEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTTTCTTAGTAACTCTTCCGTCGCCGACGATTCTCAGTCCGCCGCTCAAGTTACCGAGCTCTGTTGGGAAAGCATGCTGCTTGCAACTAGGTAGGGCGGTGGG
ATATCGGAGAGTTACAATGAGAGGGGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCAGTGCAATCGTTGAAGCGAACGA
AGAAAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAAAACGAGTGTTCT
TTGGCTCTCAAGGTTTTCGAAGATGTTAGAAACGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTTCAGTATTGGCTAGCAATGGATTATTCGAACG
AATACAAATTATTCTTTCGTACATGAAAGCAGAAACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTAGTCATAATTTAGGTGAACTGG
CGGTGGAGTCGTATTACTTGATGAAGGAAGTAGGCTGTGAGCCAGATAAGGCTTCTTTCAGGGTTGTCATAAAAGGATTGGAATCAAAGGGAGAGGCAGTTGATTTAAGA
ACTGTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGAAGAAGAGGGAGCTACAGCCATATTTATACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGTTTCTTAGTAACTCTTCCGTCGCCGACGATTCTCAGTCCGCCGCTCAAGTTACCGAGCTCTGTTGGGAAAGCATGCTGCTTGCAACTAGGTAGGGCGGTGGG
ATATCGGAGAGTTACAATGAGAGGGGGAAGTGAAAACCGGAAGCCACTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCAGTGCAATCGTTGAAGCGAACGA
AGAAAGATTTACAACAATTGGACCGAGTGTATGATTCCAAAATTAGGCGCTTATTGAAGTTTGATATGTTGGCTGTTCTTCGCGAGCTCCTTCGCCAAAACGAGTGTTCT
TTGGCTCTCAAGGTTTTCGAAGATGTTAGAAACGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTTCAGTATTGGCTAGCAATGGATTATTCGAACG
AATACAAATTATTCTTTCGTACATGAAAGCAGAAACTGATTTAGCACCTGAAATTGACGGGTTTAACGCTCTTTTGAAGGCATTGGTTAGTCATAATTTAGGTGAACTGG
CGGTGGAGTCGTATTACTTGATGAAGGAAGTAGGCTGTGAGCCAGATAAGGCTTCTTTCAGGGTTGTCATAAAAGGATTGGAATCAAAGGGAGAGGCAGTTGATTTAAGA
ACTGTGAAACAGGATGCACAAAAGCTTTATGGTGAATCACTCGAGTTTTTGGAGGAAGAAGAAGAGGGAGCTACAGCCATATTTATACACTGA
Protein sequenceShow/hide protein sequence
MMSFLVTLPSPTILSPPLKLPSSVGKACCLQLGRAVGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRTKKDLQQLDRVYDSKIRRLLKFDMLAVLRELLRQNECS
LALKVFEDVRNEHWYKPQVSLYADIISVLASNGLFERIQIILSYMKAETDLAPEIDGFNALLKALVSHNLGELAVESYYLMKEVGCEPDKASFRVVIKGLESKGEAVDLR
TVKQDAQKLYGESLEFLEEEEEGATAIFIH