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PI0006618 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006618
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPatatin
Genome locationchr04:2732050..2732412
RNA-Seq ExpressionPI0006618
SyntenyPI0006618
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647663.1 hypothetical protein Csa_003863 [Cucumis sativus]1.6e-5091.3Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHG SHTISGNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPG--FGYRI
        NRFNGIP    GY+I
Subjt:  NRFNGIPG--FGYRI
XP_008441098.1 PREDICTED: uncharacterized protein LOC103485325 [Cucumis melo]4.9e-6098.33Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTI GNALRRSDSKGSFWLLSLTWKWKKRK+NNGILPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_011658506.1 uncharacterized protein LOC105436036 [Cucumis sativus]1.2e-5895.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHG SHTISGNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_022977336.1 uncharacterized protein LOC111477686 [Cucurbita maxima]1.3e-4985.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKM G +APLAIGTRGTVGSLVMKEIEYFT  E+ERHGSS  ISG+A RRSD KGSFWL+SLTWKWKKRK NNGILPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGF YRILK DFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
XP_038882225.1 uncharacterized protein LOC120073447 [Benincasa hispida]1.9e-5695Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGG VAPLAIGTRGTVGSLVMKEIEYFT LELERHG SHTISG+ALRRSDSKGSFWLLSLTWKWKKRK+NNGILPNI SAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
TrEMBL top hitse value%identityAlignment
A0A0A0KL84 Uncharacterized protein5.8e-5995.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFT LELERHG SHTISGNALRRSDS+GSFWLLSLTWKWKKRK NNG+LPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A1S3B3D8 uncharacterized protein LOC1034853252.4e-6098.33Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTI GNALRRSDSKGSFWLLSLTWKWKKRK+NNGILPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A5D3CRM5 Uncharacterized protein2.4e-6098.33Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTI GNALRRSDSKGSFWLLSLTWKWKKRK+NNGILPNISSAVEFSKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGFGYRILKDDFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
A0A6J1EEE9 uncharacterized protein LOC1114335711.3e-4782.11Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MY+G+SRS SFSE+M GAVAPLAIGTRGT+GSLVMKEIEYFT LELERHG S  +SG+A RRSDSK SFWLLSL+WKWKKR++NNGILPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDD---FPI
        NRFNGIPGFGYRILKDD   FPI
Subjt:  NRFNGIPGFGYRILKDD---FPI
A0A6J1IJL8 uncharacterized protein LOC1114776866.4e-5085.83Show/hide
Query:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS
        MYKGMSRSRSFSEKM G +APLAIGTRGTVGSLVMKEIEYFT  E+ERHGSS  ISG+A RRSD KGSFWL+SLTWKWKKRK NNGILPNI SAVE SKS
Subjt:  MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKS

Query:  NRFNGIPGFGYRILKDDFPI
        NRFNGIPGF YRILK DFPI
Subjt:  NRFNGIPGFGYRILKDDFPI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21780.1 unknown protein6.6e-1544.04Show/hide
Query:  APLAIGTRGTVGSLVMKEIEYFTNLEL------ERHGSSHTISGNALR--RSDSKGSFWLLSLTWKWKKRKSNNG---ILPNISSAVEFSKSNRFNGIPG
        AP+AIGTRGT+GSLV KEI+YF N          R G+S        +  RS S+   W     W+ KKR++  G     P++ SAVE S  NR   +PG
Subjt:  APLAIGTRGTVGSLVMKEIEYFTNLEL------ERHGSSHTISGNALR--RSDSKGSFWLLSLTWKWKKRKSNNG---ILPNISSAVEFSKSNRFNGIPG

Query:  FGYRILKDD
        F YRILK D
Subjt:  FGYRILKDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAAAGGAATGAGCAGAAGCAGAAGCTTCAGTGAGAAAATGGGTGGTGCTGTTGCTCCACTTGCAATTGGCACACGAGGGACTGTGGGGTCGCTGGTGATGAAGGA
GATTGAGTACTTTACCAACCTTGAGCTCGAACGCCATGGCAGTTCTCACACTATCAGTGGAAATGCTTTGAGGAGAAGTGATTCTAAAGGAAGCTTTTGGCTTTTGTCAT
TGACTTGGAAGTGGAAGAAGAGAAAAAGCAACAATGGGATTCTCCCTAACATTTCCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGT
TACAGGATTCTCAAAGATGATTTTCCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAAAGGAATGAGCAGAAGCAGAAGCTTCAGTGAGAAAATGGGTGGTGCTGTTGCTCCACTTGCAATTGGCACACGAGGGACTGTGGGGTCGCTGGTGATGAAGGA
GATTGAGTACTTTACCAACCTTGAGCTCGAACGCCATGGCAGTTCTCACACTATCAGTGGAAATGCTTTGAGGAGAAGTGATTCTAAAGGAAGCTTTTGGCTTTTGTCAT
TGACTTGGAAGTGGAAGAAGAGAAAAAGCAACAATGGGATTCTCCCTAACATTTCCTCTGCTGTTGAATTCTCAAAAAGCAATCGCTTTAATGGGATTCCTGGTTTTGGT
TACAGGATTCTCAAAGATGATTTTCCCATTTGA
Protein sequenceShow/hide protein sequence
MYKGMSRSRSFSEKMGGAVAPLAIGTRGTVGSLVMKEIEYFTNLELERHGSSHTISGNALRRSDSKGSFWLLSLTWKWKKRKSNNGILPNISSAVEFSKSNRFNGIPGFG
YRILKDDFPI