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PI0006625 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006625
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr06:19843941..19844165
RNA-Seq ExpressionPI0006625
SyntenyPI0006625
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040020.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]1.2e-2168.49Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK
        M  LRK RF A TY KLKD QIGPCK+L KY+PNAYK++LPE +NIN +FN+ +LKKYHAPDGFQL +P RG+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK

KAA0054527.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-2369.86Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK
        M +LR+ RF A+ Y+KLKD QIGPCK+LAKY+PNAYK+ELPE +NINL+FN+A+LKKYHAPD FQL +P RG+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK

KAA0059835.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.7e-1355.88Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTN
        M +LRK RF ARTY KLKD Q GP ++L K+  NAYK+ELP  ++I+ +FN+A+LK Y+APD F+L +
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTN

TYK31396.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]8.0e-2176.12Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT
        M +L+KKRFLA TY KLKD QI PC+I+AKYEPNAYKL LPEGINI+ +FNIA+LKKY+ PDGFQLT
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT

XP_016899489.1 PREDICTED: uncharacterized protein LOC107990547 [Cucumis melo]7.0e-1765.67Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT
        M +L+K RFL  TY KLKD QIGPC+ILAKYEPNA K++LPEG NI+ IFN+ +L+ Y+A DGFQL+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT

TrEMBL top hitse value%identityAlignment
A0A1S4DU23 uncharacterized protein LOC1079905473.4e-1765.67Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT
        M +L+K RFL  TY KLKD QIGPC+ILAKYEPNA K++LPEG NI+ IFN+ +L+ Y+A DGFQL+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT

A0A5D3BGV8 DNA/RNA polymerases superfamily protein1.4e-2369.86Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK
        M +LR+ RF A+ Y+KLKD QIGPCK+LAKY+PNAYK+ELPE +NINL+FN+A+LKKYHAPD FQL +P RG+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK

A0A5D3CDD0 DNA/RNA polymerases superfamily protein3.4e-1765.67Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT
        M +L+K RFL  TY KLKD QIGPC+ILAKYEPNA K++LPEG NI+ IFN+ +L+ Y+A DGFQL+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT

A0A5D3DLG1 Retrovirus-related Pol polyprotein from transposon 17.66.0e-2268.49Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK
        M  LRK RF A TY KLKD QIGPCK+L KY+PNAYK++LPE +NIN +FN+ +LKKYHAPDGFQL +P RG+
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGK

A0A5D3E6W7 DNA/RNA polymerases superfamily protein3.9e-2176.12Show/hide
Query:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT
        M +L+KKRFLA TY KLKD QI PC+I+AKYEPNAYKL LPEGINI+ +FNIA+LKKY+ PDGFQLT
Subjt:  MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTATTTAAGGAAGAAAAGGTTCTTAGCTAGAACCTACAAAAAACTAAAAGACAGCCAAATTGGTCCTTGTAAAATCCTAGCTAAATACGAGCCAAATGCCTACAA
GCTTGAGCTACCAGAAGGAATCAACATCAATCTTATTTTCAACATCGCAAACCTGAAGAAGTACCATGCTCCTGATGGATTCCAACTTACTAACCCAACTCGAGGGAAAT
TTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTATTTAAGGAAGAAAAGGTTCTTAGCTAGAACCTACAAAAAACTAAAAGACAGCCAAATTGGTCCTTGTAAAATCCTAGCTAAATACGAGCCAAATGCCTACAA
GCTTGAGCTACCAGAAGGAATCAACATCAATCTTATTTTCAACATCGCAAACCTGAAGAAGTACCATGCTCCTGATGGATTCCAACTTACTAACCCAACTCGAGGGAAAT
TTTAA
Protein sequenceShow/hide protein sequence
MTYLRKKRFLARTYKKLKDSQIGPCKILAKYEPNAYKLELPEGININLIFNIANLKKYHAPDGFQLTNPTRGKF