; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006636 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006636
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPentatricopeptide repeat (PPR) superfamily protein
Genome locationchr07:6257037..6258889
RNA-Seq ExpressionPI0006636
SyntenyPI0006636
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033715.1 uncharacterized protein E6C27_scaffold239G001880 [Cucumis melo var. makuwa]4.4e-7475.8Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDD---DGDDEDEDE----DDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFANKL
        MEMI+EMELFGPSEIDF FEELDDGATN GDDD   DG+DEDED+    DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFANKL
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDD---DGDDEDEDE----DDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFANKL

Query:  SEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWL
        SEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKLEENLESHG INHHGHESSSSKDGLNLMDALDE+IPASEASFY L
Subjt:  SEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWL

Query:  EMIKVQLFAGNSHPEEIVV
        EMIKVQLF GNSHP ++ +
Subjt:  EMIKVQLFAGNSHPEEIVV

KAE8650472.1 hypothetical protein Csa_009877 [Cucumis sativus]4.8e-7372.85Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGA++DGDDDD          DDEDED+DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSE+ASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE Q+LEENLE HG INHHGHESSSSKDGLNLM+ALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP  + +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

TYK23008.1 uncharacterized protein E5676_scaffold386G001160 [Cucumis melo var. makuwa]6.3e-7373.76Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGATN GDDDD D         D+DED DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKL+ENLESHG INHHGHESSSS DGLNLMDALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP ++ +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

XP_004140749.2 LOW QUALITY PROTEIN: uncharacterized protein At3g49140 [Cucumis sativus]4.8e-7372.85Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGA++DGDDDD          DDEDED+DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSE+ASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE Q+LEENLE HG INHHGHESSSSKDGLNLM+ALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP  + +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

XP_008439307.1 PREDICTED: uncharacterized protein At3g49140-like [Cucumis melo]3.4e-7474.66Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGATN GDDDD D         D+DED DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKLEENLESHG INHHGHESSSSKDGLNLMDALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP ++ +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

TrEMBL top hitse value%identityAlignment
A0A0A0LBJ5 Uncharacterized protein2.3e-7372.85Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGA++DGDDDD          DDEDED+DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDD---------GDDEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSE+ASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE Q+LEENLE HG INHHGHESSSSKDGLNLM+ALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP  + +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

A0A1S3AY35 uncharacterized protein At3g49140-like1.6e-7474.66Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGATN GDDDD D         D+DED DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKLEENLESHG INHHGHESSSSKDGLNLMDALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP ++ +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

A0A5A7SX21 Uncharacterized protein2.1e-7475.8Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDD---DGDDEDEDE----DDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFANKL
        MEMI+EMELFGPSEIDF FEELDDGATN GDDD   DG+DEDED+    DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFANKL
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDD---DGDDEDEDE----DDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFANKL

Query:  SEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWL
        SEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKLEENLESHG INHHGHESSSSKDGLNLMDALDE+IPASEASFY L
Subjt:  SEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWL

Query:  EMIKVQLFAGNSHPEEIVV
        EMIKVQLF GNSHP ++ +
Subjt:  EMIKVQLFAGNSHPEEIVV

A0A5D3DHT3 Uncharacterized protein3.1e-7373.76Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN
        MEMI+EMELFGPSEIDF FEELDDGATN GDDDD D         D+DED DDDDADDEYNR                 TLGDWAKLETMRSSHPMHFAN
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGD---------DEDEDEDDDDADDEYNR-----------------TLGDWAKLETMRSSHPMHFAN

Query:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY
        KLSEVASDDPIDWMEQPPATLVIQG              KHLSSRHLSNGDINE QKL+ENLESHG INHHGHESSSS DGLNLMDALDE+IPASEASFY
Subjt:  KLSEVASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFY

Query:  WLEMIKVQLFAGNSHPEEIVV
         LEMIKVQLF GNSHP ++ +
Subjt:  WLEMIKVQLFAGNSHPEEIVV

A0A6J1CHK0 uncharacterized protein At3g49140-like3.7e-6366.98Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGAT-NDGDDDDGDDED----EDEDDDDADDEY-----------------NRTLGDWAKLETMRSSHPMHFANKLSE
        MEMI++MELFGPSE+DF FEELDD AT ++GDDDDGDD+D    +D D+DD DDEY                 + TLGDWAKLETMRSSHPM+FANKLSE
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGAT-NDGDDDDGDDED----EDEDDDDADDEY-----------------NRTLGDWAKLETMRSSHPMHFANKLSE

Query:  VASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEM
        VASDDPIDWMEQPPATLVIQG              +HLSSRH SNGDINE QK E+NLE+HG INHH HESSSSKDGLNL D LD NIP SEASFY LEM
Subjt:  VASDDPIDWMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEM

Query:  IKVQLFAGNSHPEEI
        IK+QLF G++HP  +
Subjt:  IKVQLFAGNSHPEEI

SwissProt top hitse value%identityAlignment
Q0WMN5 Uncharacterized protein At3g491401.4e-2238.6Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDG------------------ATNDGDDDDGDDEDEDEDDDDADDEYNRTLGDWAKLETMRSSHPMHFANKLSEVASD
        MEMI EMEL G S+ DF  E+ + G                     D D+DD DD+D+DEDDDD+D +   +LGDWA LETMRS HPM FA +++EVAS+
Subjt:  MEMIDEMELFGPSEIDFVFEELDDG------------------ATNDGDDDDGDDEDEDEDDDDADDEYNRTLGDWAKLETMRSSHPMHFANKLSEVASD

Query:  DPIDWMEQPPATLVIQGKHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPA----------------SEASFYWLEMIK
        DP+DWM+QP A L IQG      H+   D ++ QK   +  S          ++ +KD  NL+D L++N  A                +  +FY LEMI+
Subjt:  DPIDWMEQPPATLVIQGKHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPA----------------SEASFYWLEMIK

Query:  VQLFAGNSHPEEIVV
        +QL        E+ V
Subjt:  VQLFAGNSHPEEIVV

Arabidopsis top hitse value%identityAlignment
AT3G49140.1 Pentatricopeptide repeat (PPR) superfamily protein9.9e-2438.6Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDG------------------ATNDGDDDDGDDEDEDEDDDDADDEYNRTLGDWAKLETMRSSHPMHFANKLSEVASD
        MEMI EMEL G S+ DF  E+ + G                     D D+DD DD+D+DEDDDD+D +   +LGDWA LETMRS HPM FA +++EVAS+
Subjt:  MEMIDEMELFGPSEIDFVFEELDDG------------------ATNDGDDDDGDDEDEDEDDDDADDEYNRTLGDWAKLETMRSSHPMHFANKLSEVASD

Query:  DPIDWMEQPPATLVIQGKHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPA----------------SEASFYWLEMIK
        DP+DWM+QP A L IQG      H+   D ++ QK   +  S          ++ +KD  NL+D L++N  A                +  +FY LEMI+
Subjt:  DPIDWMEQPPATLVIQGKHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPA----------------SEASFYWLEMIK

Query:  VQLFAGNSHPEEIVV
        +QL        E+ V
Subjt:  VQLFAGNSHPEEIVV

AT5G24060.1 Pentatricopeptide repeat (PPR) superfamily protein1.0e-2035.45Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGAT-----NDGDDDDGDDEDEDE-----DDDDADDEY----NRTLGDWAKLETMRSSHPMHFANKLSEVASDDPID
        MEMI +MEL  PS I F  EE++DG +     N GD+D+G+D+D++E     +D D +D Y    + +LGDWA LETMR  HPM+FA +++EVAS DP++
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGAT-----NDGDDDDGDDEDEDE-----DDDDADDEY----NRTLGDWAKLETMRSSHPMHFANKLSEVASDDPID

Query:  WMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEMIKVQLFAG
        WM+QP A L IQG              KH+S    +  D N+++  E + E   GI  +  E    ++  N +             +Y LE+I++QL   
Subjt:  WMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEMIKVQLFAG

Query:  NSHPEEIVVPTPNPDPPTML
          H  E+ V       P ++
Subjt:  NSHPEEIVVPTPNPDPPTML

AT5G24060.2 Pentatricopeptide repeat (PPR) superfamily protein1.0e-2035.45Show/hide
Query:  MEMIDEMELFGPSEIDFVFEELDDGAT-----NDGDDDDGDDEDEDE-----DDDDADDEY----NRTLGDWAKLETMRSSHPMHFANKLSEVASDDPID
        MEMI +MEL  PS I F  EE++DG +     N GD+D+G+D+D++E     +D D +D Y    + +LGDWA LETMR  HPM+FA +++EVAS DP++
Subjt:  MEMIDEMELFGPSEIDFVFEELDDGAT-----NDGDDDDGDDEDEDE-----DDDDADDEY----NRTLGDWAKLETMRSSHPMHFANKLSEVASDDPID

Query:  WMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEMIKVQLFAG
        WM+QP A L IQG              KH+S    +  D N+++  E + E   GI  +  E    ++  N +             +Y LE+I++QL   
Subjt:  WMEQPPATLVIQG--------------KHLSSRHLSNGDINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEMIKVQLFAG

Query:  NSHPEEIVVPTPNPDPPTML
          H  E+ V       P ++
Subjt:  NSHPEEIVVPTPNPDPPTML


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATGATCGATGAGATGGAGTTGTTCGGTCCATCAGAAATTGATTTTGTATTTGAAGAGCTTGATGATGGGGCTACAAATGATGGAGATGATGATGATGGTGATGA
TGAAGATGAAGATGAAGACGACGACGATGCAGATGATGAATACAATAGGACCTTGGGAGATTGGGCAAAACTTGAGACAATGCGTTCTTCACATCCGATGCATTTTGCCA
ACAAGCTTTCAGAGGTTGCATCAGATGATCCTATTGATTGGATGGAACAGCCCCCAGCAACTTTAGTGATTCAAGGTAAGCATCTATCCAGTCGCCATTTGAGTAATGGT
GACATAAACGAGGATCAGAAACTTGAAGAGAACCTTGAAAGTCATGGTGGGATCAATCATCATGGTCATGAATCAAGTTCATCCAAAGATGGTTTAAACTTGATGGATGC
ATTGGATGAAAATATTCCAGCGAGTGAGGCTTCATTTTACTGGCTGGAGATGATAAAAGTTCAGCTATTTGCAGGAAATTCACACCCAGAAGAGATTGTGGTTCCAACAC
CTAATCCAGACCCACCTACCATGTTGGAGCTTGTGTTAATTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATGATCGATGAGATGGAGTTGTTCGGTCCATCAGAAATTGATTTTGTATTTGAAGAGCTTGATGATGGGGCTACAAATGATGGAGATGATGATGATGGTGATGA
TGAAGATGAAGATGAAGACGACGACGATGCAGATGATGAATACAATAGGACCTTGGGAGATTGGGCAAAACTTGAGACAATGCGTTCTTCACATCCGATGCATTTTGCCA
ACAAGCTTTCAGAGGTTGCATCAGATGATCCTATTGATTGGATGGAACAGCCCCCAGCAACTTTAGTGATTCAAGGTAAGCATCTATCCAGTCGCCATTTGAGTAATGGT
GACATAAACGAGGATCAGAAACTTGAAGAGAACCTTGAAAGTCATGGTGGGATCAATCATCATGGTCATGAATCAAGTTCATCCAAAGATGGTTTAAACTTGATGGATGC
ATTGGATGAAAATATTCCAGCGAGTGAGGCTTCATTTTACTGGCTGGAGATGATAAAAGTTCAGCTATTTGCAGGAAATTCACACCCAGAAGAGATTGTGGTTCCAACAC
CTAATCCAGACCCACCTACCATGTTGGAGCTTGTGTTAATTCTTTAA
Protein sequenceShow/hide protein sequence
MEMIDEMELFGPSEIDFVFEELDDGATNDGDDDDGDDEDEDEDDDDADDEYNRTLGDWAKLETMRSSHPMHFANKLSEVASDDPIDWMEQPPATLVIQGKHLSSRHLSNG
DINEDQKLEENLESHGGINHHGHESSSSKDGLNLMDALDENIPASEASFYWLEMIKVQLFAGNSHPEEIVVPTPNPDPPTMLELVLIL