CuGenDBv2

Gene ID	PI0006643
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	protein CASPARIAN STRIP INTEGRITY FACTOR 1
Genome location	chr11:27703089..27705224
RNA-Seq Expression	PI0006643
Synteny	PI0006643
Gene Ontology terms	GO:0010039 - response to iron ion (biological process) GO:0010447 - response to acidic pH (biological process) GO:0055072 - iron ion homeostasis (biological process) GO:2000067 - regulation of root morphogenesis (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0048226 - Casparian strip (cellular component)
InterPro domains	IPR038974 - Protein Casparian strip integrity factor 1/2

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460971.1 PREDICTED: uncharacterized protein LOC103499698 [Cucumis melo]

1.3e-38

95.6

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVP+VVA GGVVHEDAKRKTRG EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

XP_011649242.1 protein CASPARIAN STRIP INTEGRITY FACTOR 2 [Cucumis sativus]

9.3e-40

95.56

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVP+VVAKGGVVHED KRKTRGEME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

XP_022146128.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1 [Momordica charantia]

1.6e-28

78.89

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+D +RK  GEMED IHERLLR NTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

XP_022986650.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Cucurbita maxima]

8.2e-28

79.12

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Query:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MF KYKL F+ F LLLSTSF STICIAGRPSKLV +VV   GVVHE  KR TR EMED +HERLLRVNTKDYGRYDP+P+FVKPPFKLIPN
Subjt:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

XP_038902215.1 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like [Benincasa hispida]

1.3e-38

96.67

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVP+VVA GGVVHEDAKRKTRGEMED IHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ22 Uncharacterized protein

4.5e-40

95.56

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVP+VVAKGGVVHED KRKTRGEME+IIHERLLRVNTKDYGRYDP+PAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

A0A1S3CEV9 uncharacterized protein LOC103499698

6.5e-39

95.6

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVP+VVA GGVVHEDAKRKTRG EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

A0A5A7TUS0 Uncharacterized protein

6.5e-39

95.6

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYKLSFIFILLLSTSFLS+ICIAGRPSKLVP+VVA GGVVHEDAKRKTRG EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRG-EMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

A0A6J1CXR3 protein CASPARIAN STRIP INTEGRITY FACTOR 1

8.0e-29

78.89

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Query:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MFLKYK SF+F LL+STS LST   AGRPSKLVP+  A GGVVH+D +RK  GEMED IHERLLR NTKDYGRYDPAPAFVKPPFKLIPN
Subjt:  MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

A0A6J1JEM0 protein CASPARIAN STRIP INTEGRITY FACTOR 1-like

4.0e-28

79.12

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Query:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        MF KYKL F+ F LLLSTSF STICIAGRPSKLV +VV   GVVHE  KR TR EMED +HERLLRVNTKDYGRYDP+P+FVKPPFKLIPN
Subjt:  MFLKYKLSFI-FILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

SwissProt top hits

e value

%identity

Alignment

O65684 Protein CASPARIAN STRIP INTEGRITY FACTOR 2

2.0e-08

42.39

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       P+VV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

Q84MD2 Protein CASPARIAN STRIP INTEGRITY FACTOR 1

4.0e-09

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V K +     + E+   ++  E     HERLLR+NTKDYG   P+P   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

Arabidopsis top hits

e value

%identity

Alignment

AT2G16385.1 unknown protein

2.8e-10

47.06

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        KL FIF +++S S LS +  AGRPS  V K +     + E+   ++  E     HERLLR+NTKDYG   P+P   +PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

AT4G34600.1 unknown protein

1.4e-09

42.39

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Query:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN
        KL FI  LL+S S  + +C AGR S L+       P+VV +   +HE              HER+LR+N++DYG   P P  V+PPFKLIPN
Subjt:  KLSFIFILLLSTSFLSTICIAGRPSKLV-------PKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

Sequences

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CDS sequence

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ATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCTCTCAACCTCTTTCTTATCCACCATTTGCATTGCAGGTCGACCATCTAAGTTGGTTCCTAAGGTTGT
TGCTAAGGGTGGAGTTGTGCATGAGGATGCAAAGAGGAAGACAAGAGGTGAAATGGAAGACATCATCCATGAAAGACTTTTGAGGGTAAACACCAAAGACTATGGAAGAT
ATGATCCAGCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATCCCCAACTAA

mRNA sequence

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CACTTTTGTCCAATTCAATGTCCCTTAAATCATACATAAGGAAGCATCATTTGGGTCTATGCTCTTAGGAAAAACATAAGAAGAAGAAGAAGAAGAAAAAGACCCAACTT
TGAAAAAACATATAAAAGTGGTCATATTATTAAGGTTGTTTCTACTTTCTATCATATTTGAGAATCATGTTTCTTAAGTACAAGCTTAGCTTCATCTTCATCCTCCTCCT
CTCAACCTCTTTCTTATCCACCATTTGCATTGCAGGTCGACCATCTAAGTTGGTTCCTAAGGTTGTTGCTAAGGGTGGAGTTGTGCATGAGGATGCAAAGAGGAAGACAA
GAGGTGAAATGGAAGACATCATCCATGAAAGACTTTTGAGGGTAAACACCAAAGACTATGGAAGATATGATCCAGCCCCAGCCTTTGTTAAGCCTCCTTTCAAGCTCATC
CCCAACTAATAAGGGCAGAAAAAAAAATATCATCACCAACCTGGGAGAGTACCTTATAAATTACATAAATAATAAGAAAAAATATCATTGTGTTTCATATAGTATAAGTA
TTATATATATGTATTAATCATATATAATATAGTGTATAATATATGGTCATAGACTCACATATATGAATATAAAACCTTTGTAATGTTTTGCTTGAGTTACTAAGTAATAT
ATATATATTATTACATATTCTGTATCTTGG

Protein sequence

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MFLKYKLSFIFILLLSTSFLSTICIAGRPSKLVPKVVAKGGVVHEDAKRKTRGEMEDIIHERLLRVNTKDYGRYDPAPAFVKPPFKLIPN

PI0006643 (gene) of Melon (PI 482460) v1 genome