; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006653 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006653
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit B
Genome locationchr02:843032..843406
RNA-Seq ExpressionPI0006653
SyntenyPI0006653
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR003958 - Transcription factor CBF/NF-Y/archaeal histone domain
IPR009072 - Histone-fold
IPR027113 - Transcription factor NFYB/HAP3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050888.1 beta-galactosidase 15-like [Cucumis melo var. makuwa]3.5e-5390.55Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKAIAFQ-DQHGVED-EYN-DEHQLS
        SDKAI FQ  QHGVED EYN + HQLS
Subjt:  SDKAIAFQ-DQHGVED-EYN-DEHQLS

KAE8653368.1 hypothetical protein Csa_006911 [Cucumis sativus]5.6e-5191.45Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIVP+KGKISKEAKKRMQECANEFI+FVTSEAAQRC NENRRTLNGDDIYWAF SLGLDNYAEASSKYLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKA-IAFQDQHGVEDE
        SDKA I FQDQH  E++
Subjt:  SDKA-IAFQDQHGVEDE

XP_004135781.1 nuclear transcription factor Y subunit B-4 [Cucumis sativus]5.6e-5191.45Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIVP+KGKISKEAKKRMQECANEFI+FVTSEAAQRC NENRRTLNGDDIYWAF SLGLDNYAEASSKYLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKA-IAFQDQHGVEDE
        SDKA I FQDQH  E++
Subjt:  SDKA-IAFQDQHGVEDE

XP_008451143.1 PREDICTED: beta-galactosidase 15-like [Cucumis melo]1.1e-5193.1Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKAIAFQ-DQHGVED
        SDKAI FQ  QHGVED
Subjt:  SDKAIAFQ-DQHGVED

XP_038880507.1 nuclear transcription factor Y subunit B-4-like [Benincasa hispida]5.4e-4679.2Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWE+LQLPIANV RIMKKI+PQK KISKEAK+ MQECA+EFISFV SEAA++CH ENRRTLNGDDI WA GS GLDNYAE S+KYLLKFREAERIK 
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKAIAFQDQHGV-EDEYNDEHQLS
        S+KAI FQ  H   ED+ NDEHQLS
Subjt:  SDKAIAFQDQHGV-EDEYNDEHQLS

TrEMBL top hitse value%identityAlignment
A0A0A0LW12 CBFD_NFYB_HMF domain-containing protein1.9e-4184.11Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI
        E L+LPIANVERIMKKI+PQKGKISKEAKK+MQECANEFISFVTSEAAQRC NENRRTLNGDDIYWAFGSLGLDNYAEASSK+LL FRE ERIK  +K  
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI

Query:  AFQDQHG
        + +D HG
Subjt:  AFQDQHG

A0A0A0LZ17 CBFD_NFYB_HMF domain-containing protein2.7e-5191.45Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKIVP+KGKISKEAKKRMQECANEFI+FVTSEAAQRC NENRRTLNGDDIYWAF SLGLDNYAEASSKYLLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKA-IAFQDQHGVEDE
        SDKA I FQDQH  E++
Subjt:  SDKA-IAFQDQHGVEDE

A0A1S3BQ87 Beta-galactosidase5.4e-5293.1Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKAIAFQ-DQHGVED
        SDKAI FQ  QHGVED
Subjt:  SDKAIAFQ-DQHGVED

A0A5A7U6S7 Nuclear transcription factor Y subunit B-46.4e-3783.51Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASD
        E L+LPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQRCH ENRRTLNGDDI WAF S GLDNYAE  +KYLLK+RE ERIK  +
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASD

A0A5D3CFV4 Beta-galactosidase 15-like1.7e-5390.55Show/hide
Query:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA
        MGENWESLQLPIANVERIMKKI+PQKGKISKEAKK MQECANEFISFVTSEAAQ+CHNENRRTLNGDDIYWAFGSLGLDNYAEASS  LLKFREAERIKA
Subjt:  MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKA

Query:  SDKAIAFQ-DQHGVED-EYN-DEHQLS
        SDKAI FQ  QHGVED EYN + HQLS
Subjt:  SDKAIAFQ-DQHGVED-EYN-DEHQLS

SwissProt top hitse value%identityAlignment
O04027 Nuclear transcription factor Y subunit B-48.1e-2965.22Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAER
        E   LPIANV R+MK+I+P   KISKEAK+ +QECA EFISFVT EA+++CH ENR+T+NGDDI+WA  +LGLDNYA+A  ++L K+REAER
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAER

P25207 Nuclear transcription factor Y subunit beta7.1e-2558.89Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREA
        + + LPIANV RIMK  +PQ GKI+K+AK+ +QEC +EFISF+TSEA++RCH E R+T+NG+DI +A  +LG D+Y E    YL KFREA
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREA

P63139 Nuclear transcription factor Y subunit beta2.1e-2450.43Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI
        + + LPIANV RIMK  +PQ GKI+K+AK+ +QEC +EFISF+TSEA++RCH E R+T+NG+DI +A  +LG D+Y E    YL KFREA +    +K I
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI

Query:  --AFQDQHGVEDEYNDE
          A     G+ +E  +E
Subjt:  --AFQDQHGVEDEYNDE

Q32KW0 Nuclear transcription factor Y subunit beta9.3e-2551.28Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI
        + + LPIANV RIMK  +PQ GKI+K+AK+ +QEC +EFISF+TSEA++RCH E R+T+NG+DI +A  +LG D+Y E    YL KFREA +    +K I
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAI

Query:  --AFQDQHGVEDEYNDE
          A     G+ +E  DE
Subjt:  --AFQDQHGVEDEYNDE

Q6RG77 Nuclear transcription factor Y subunit beta7.1e-2558.89Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREA
        + + LPIANV RIMK  +PQ GKI+K+AK+ +QEC +EFISF+TSEA++RCH E R+T+NG+DI +A  +LG D+Y E    YL KFREA
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREA

Arabidopsis top hitse value%identityAlignment
AT1G09030.1 nuclear factor Y, subunit B45.8e-3065.22Show/hide
Query:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAER
        E   LPIANV R+MK+I+P   KISKEAK+ +QECA EFISFVT EA+++CH ENR+T+NGDDI+WA  +LGLDNYA+A  ++L K+REAER
Subjt:  ESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAER

AT2G13570.1 nuclear factor Y, subunit B76.2e-2446.96Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFR--EAERIKASDKAIAF
        LPIANV RIMKK++P  GKISK+AK+ +QEC +EFISFVT EA+ +C  E R+T+NGDDI WA  +LG ++Y      YL K+R  E E++ +  +    
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFR--EAERIKASDKAIAF

Query:  QDQHGVEDEYNDEHQ
        Q Q  ++ + +  +Q
Subjt:  QDQHGVEDEYNDEHQ

AT2G47810.1 nuclear factor Y, subunit B53.3e-2560.92Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE
        LPIANV RIMK I+P   K+SKEAK+ MQEC +EFISFVT EA+ +CH E R+T+NGDDI WA  +LG D+YA    KYL ++R  E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE

AT3G53340.1 nuclear factor Y, subunit B104.7e-2455.17Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE
        LPIAN+ RIMK+ +P  GKI+K+AK+ MQEC +EFISFVTSEA+ +C  E R+T+NGDD+ WA  +LG ++Y +    YL+++RE E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE

AT5G47640.1 nuclear factor Y, subunit B22.8e-2458.62Show/hide
Query:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE
        LPIANV RIMKK +P   KISK+AK+ MQEC +EFISFVT EA+ +C  E R+T+NGDD+ WA  +LG ++Y E    YL +FRE E
Subjt:  LPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAATTGGGAAAGTCTTCAACTTCCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGAGAAT
GCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACAATGAGAATAGAAGAACTCTCAATGGTGATGATATTTATTGGGCATTTG
GTTCTCTTGGCTTAGATAATTATGCTGAGGCTTCTTCCAAGTACTTGCTTAAGTTTAGAGAAGCTGAGAGAATCAAAGCTTCTGATAAAGCTATTGCTTTTCAAGATCAA
CATGGAGTAGAGGATGAGTACAATGATGAACATCAATTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAATTGGGAAAGTCTTCAACTTCCAATTGCCAATGTTGAGAGAATAATGAAGAAGATAGTTCCACAAAAGGGGAAGATTTCAAAAGAAGCCAAGAAGAGAAT
GCAAGAATGTGCAAATGAGTTCATTAGCTTTGTAACAAGTGAAGCAGCACAAAGATGTCACAATGAGAATAGAAGAACTCTCAATGGTGATGATATTTATTGGGCATTTG
GTTCTCTTGGCTTAGATAATTATGCTGAGGCTTCTTCCAAGTACTTGCTTAAGTTTAGAGAAGCTGAGAGAATCAAAGCTTCTGATAAAGCTATTGCTTTTCAAGATCAA
CATGGAGTAGAGGATGAGTACAATGATGAACATCAATTATCATAA
Protein sequenceShow/hide protein sequence
MGENWESLQLPIANVERIMKKIVPQKGKISKEAKKRMQECANEFISFVTSEAAQRCHNENRRTLNGDDIYWAFGSLGLDNYAEASSKYLLKFREAERIKASDKAIAFQDQ
HGVEDEYNDEHQLS