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PI0006655 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006655
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:21599215..21599379
RNA-Seq ExpressionPI0006655
SyntenyPI0006655
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033880.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.9e-1371.7Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCN
        MTN D+LDDIDE DST+ TT G+DIHYIET + W+QWRDELA +MFS+WEL N
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCN

KAA0041022.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]4.5e-1368.52Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ D+IDE DST+ TT  +DIHYIETS+ WSQWRD+LA +MF++WELCNQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

KAA0052247.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.6e-1370.37Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ DDIDE  ST+TTT  +DIHYIETS+ WSQWRD+L  +MFSNWEL NQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

KAA0063753.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1464.81Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN++++DD+DE DSTY TTGG++I+YIE S+ WS+WRD+LA  MFS+WELC+Q
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

TYK01811.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]7.6e-1370.37Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ DDIDE  ST+TTT  +DIHYIETS+ WSQWRD+L  +MFSNWEL NQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TC28 Putative nuclease HARBI12.2e-1368.52Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ D+IDE DST+ TT  +DIHYIETS+ WSQWRD+LA +MF++WELCNQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

A0A5A7UCP5 Putative nuclease HARBI13.7e-1370.37Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ DDIDE  ST+TTT  +DIHYIETS+ WSQWRD+L  +MFSNWEL NQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

A0A5A7V6M3 Putative nuclease HARBI14.4e-1464.81Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN++++DD+DE DSTY TTGG++I+YIE S+ WS+WRD+LA  MFS+WELC+Q
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

A0A5D3BPW4 Putative nuclease HARBI13.7e-1370.37Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ
        MTN D+ DDIDE  ST+TTT  +DIHYIETS+ WSQWRD+L  +MFSNWEL NQ
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ

A0A5D3BQ11 Putative nuclease HARBI14.8e-1371.7Show/hide
Query:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCN
        MTN D+LDDIDE DST+ TT G+DIHYIET + W+QWRDELA +MFS+WEL N
Subjt:  MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACGTACTAGATGACATTGATGAGGGTGATTCTACATACACCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGATGAGCTTGCCAGAAAAATGTTTAGTAATTGGGAGTTGTGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACGTACTAGATGACATTGATGAGGGTGATTCTACATACACCACCACTGGCGGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGATGAGCTTGCCAGAAAAATGTTTAGTAATTGGGAGTTGTGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDVLDDIDEGDSTYTTTGGEDIHYIETSSAWSQWRDELARKMFSNWELCNQ