; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006680 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006680
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:4646250..4646789
RNA-Seq ExpressionPI0006680
SyntenyPI0006680
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]9.8e-6580.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQL LTDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RLQSIN ESEQL ILS EK E ID++ELE+AKLQDE N LESTPAI EEA EALATVR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]7.5e-6579.33Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI  + LTPLEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQLDEKTSAI+EAL L+++L+EDA VIQERA QLSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        EKKELE RLQS+N ESEQL ILSCEK E I ++ELE+AKLQDE N LE TPAITEE  EALA VR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]5.2e-6680.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQL+EKTSAIKE L L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RL+SIN ESEQL ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATVR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]8.8e-6680.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRT FEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RLQSIN ESEQL ILSCEK E ID++ELE+AKLQDE N LESTPAI EEA EALAT+R+SMEAT EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

TYK06376.1 hypothetical protein E5676_scaffold163G00680 [Cucumis melo var. makuwa]1.7e-6478.21Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD+LTPLEEYLNSY KRVDNFNDVQSSY AQLL TDK RQL+EKTS IKEAL L++QL+ED KVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KEL+ RLQSIN ESEQL ILSCEK E ID++EL+I KLQD+ N LESTPAITEEA EALAT+ KSM+A  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

TrEMBL top hitse value%identityAlignment
A0A5A7TYW3 Uncharacterized protein8.1e-6579.33Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYS QLL TDKTRQL+EKTSAIKEAL L+ +L+ D KVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RL+SIN ESEQL ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATV +SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

A0A5A7U8X8 PMD domain-containing protein4.7e-6580.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQL LTDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RLQSIN ESEQL ILS EK E ID++ELE+AKLQDE N LESTPAI EEA EALATVR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

A0A5A7V3X5 PMD domain-containing protein3.6e-6579.33Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI  + LTPLEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQLDEKTSAI+EAL L+++L+EDA VIQERA QLSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        EKKELE RLQS+N ESEQL ILSCEK E I ++ELE+AKLQDE N LE TPAITEE  EALA VR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

A0A5A7VHW8 PMD domain-containing protein2.5e-6680.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRTPFEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQL+EKTSAIKE L L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RL+SIN ESEQL ILSCEK E ID++ELE+AKLQDE N LESTPAITEEA EALATVR+SMEA  EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

A0A5D3BW91 Uncharacterized protein4.3e-6680.45Show/hide
Query:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL
        MRT FEYIPRLRPEIA VLSGI KI AD LT LEEYLNSY KRVDNFNDVQSSYSAQLL TDK RQL+EKTSAIKEAL L+ QL+ DAKVIQER  +LSL
Subjt:  MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSL

Query:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK
        E+KELE RLQSIN ESEQL ILSCEK E ID++ELE+AKLQDE N LESTPAI EEA EALAT+R+SMEAT EEF+NFK
Subjt:  EKKELESRLQSINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTT
GAATAGCTACTTTAAAAGGGTAGACAACTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCA
TCAAAGAAGCCTTGGCTTTGATAGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAG
AGTATAAATACTGAGTCTGAACAGCTATTCATCTTATCTTGTGAGAAAAATGAGACCATAGATAAGAAGGAATTGGAGATTGCTAAGCTCCAAGACGAAGCCAATGCTCT
TGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACGGTTCGTAAGAGTATGGAGGCTACACTCGAAGAATTCAGGAACTTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCACTCCTTTTGAATATATCCCAAGGCTTAGGCCGGAAATAGCAAAGGTTCTTTCAGGAATTGCAAAGATCCAAGCAGACAACTTGACTCCTCTTGAAGAATATTT
GAATAGCTACTTTAAAAGGGTAGACAACTTCAATGATGTACAATCTTCATATTCCGCACAACTGTTGTTGACGGATAAAACTCGTCAATTGGACGAGAAGACATCTGCCA
TCAAAGAAGCCTTGGCTTTGATAGACCAACTACAGGAAGATGCCAAAGTTATTCAGGAGAGGGCTACGCAGTTATCCTTGGAAAAGAAAGAACTGGAGAGCAGACTTCAG
AGTATAAATACTGAGTCTGAACAGCTATTCATCTTATCTTGTGAGAAAAATGAGACCATAGATAAGAAGGAATTGGAGATTGCTAAGCTCCAAGACGAAGCCAATGCTCT
TGAAAGCACCCCTGCTATTACCGAAGAAGCCACTGAGGCCTTAGCTACGGTTCGTAAGAGTATGGAGGCTACACTCGAAGAATTCAGGAACTTCAAGTAG
Protein sequenceShow/hide protein sequence
MRTPFEYIPRLRPEIAKVLSGIAKIQADNLTPLEEYLNSYFKRVDNFNDVQSSYSAQLLLTDKTRQLDEKTSAIKEALALIDQLQEDAKVIQERATQLSLEKKELESRLQ
SINTESEQLFILSCEKNETIDKKELEIAKLQDEANALESTPAITEEATEALATVRKSMEATLEEFRNFK