; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0006682 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006682
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr10:13557938..13559048
RNA-Seq ExpressionPI0006682
SyntenyPI0006682
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.1e-5172.85Show/hide
Query:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY
        +A G  IQQF  DVTQEYIH Y NITRLYITQ    +G  RSNN R  DVADD QQVLDICNNN+R+MEEIH MY +PIVPP +HRGRV+VEEAELD VY
Subjt:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY

Query:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
        HNVEE+   TQ Q+QTGYGSPM++MP FGVGYCD EV+T YYDSGV PSSS
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.6e-6281.63Show/hide
Query:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV
        G SIQQF  DVTQEYIHWYNNITRLYIT+P  AVGHLRSNN R  DVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHRGRVRVEEAELD VYHNV
Subjt:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV

Query:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS
        EEVP  TQTQSQTGYGSPM +MP FG GY DSEV T YYD+G+ PSS
Subjt:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-5878.15Show/hide
Query:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY
        +A   SIQQF +DVTQEYIHWY+NITRLYIT+PG AVG  RSNN R  DVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEEAELD VY
Subjt:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY

Query:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
        HNVEEVP  TQTQSQTGYGSPM +MP F  GYCD EV   YYD+GV PSSS
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.1e-6382.31Show/hide
Query:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV
        G SIQQF  DVTQEYIHWYNNITRLYIT+PG AVGHLRSNN R  DVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHRGRVRVEEAELD VYHNV
Subjt:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV

Query:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS
        EEVP  TQTQSQTGYGSPM +MP FG GY DSEV T YYD+G+ PSS
Subjt:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.9e-6077.27Show/hide
Query:  RRFIATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD
        RRF+    SIQQF  DVTQEYIH YNNITRLYIT+PG  VGHLRSNN R  DV +DPQQVLDICNNNERYME+IH +YD+PIVPPPVHR R RVEEAELD
Subjt:  RRFIATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD

Query:  -VYHNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
         VYHNVEEVP  TQTQSQTGYGSPM +MP FG GYCDSEVS  YYD+ V P SS
Subjt:  -VYHNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-5172.85Show/hide
Query:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY
        +A G  IQQF  DVTQEYIH Y NITRLYITQ    +G  RSNN R  DVADD QQVLDICNNN+R+MEEIH MY +PIVPP +HRGRV+VEEAELD VY
Subjt:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY

Query:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
        HNVEE+   TQ Q+QTGYGSPM++MP FGVGYCD EV+T YYDSGV PSSS
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-6281.63Show/hide
Query:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV
        G SIQQF  DVTQEYIHWYNNITRLYIT+P  AVGHLRSNN R  DVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHRGRVRVEEAELD VYHNV
Subjt:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV

Query:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS
        EEVP  TQTQSQTGYGSPM +MP FG GY DSEV T YYD+G+ PSS
Subjt:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.5e-5978.15Show/hide
Query:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY
        +A   SIQQF +DVTQEYIHWY+NITRLYIT+PG AVG  RSNN R  DVADD QQ LDICNNNERYMEEIH MYD+PIVPPPVHRG VRVEEAELD VY
Subjt:  IATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VY

Query:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
        HNVEEVP  TQTQSQTGYGSPM +MP F  GYCD EV   YYD+GV PSSS
Subjt:  HNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-6382.31Show/hide
Query:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV
        G SIQQF  DVTQEYIHWYNNITRLYIT+PG AVGHLRSNN R  DVADDPQQVL+ICNNN+RYMEEIH MYD+ IVPPPVHRGRVRVEEAELD VYHNV
Subjt:  GASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD-VYHNV

Query:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS
        EEVP  TQTQSQTGYGSPM +MP FG GY DSEV T YYD+G+ PSS
Subjt:  EEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSS

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein9.1e-6177.27Show/hide
Query:  RRFIATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD
        RRF+    SIQQF  DVTQEYIH YNNITRLYIT+PG  VGHLRSNN R  DV +DPQQVLDICNNNERYME+IH +YD+PIVPPPVHR R RVEEAELD
Subjt:  RRFIATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPPVHRGRVRVEEAELD

Query:  -VYHNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS
         VYHNVEEVP  TQTQSQTGYGSPM +MP FG GYCDSEVS  YYD+ V P SS
Subjt:  -VYHNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATCTACTATCTGGACGAACACACGTTAGTCAGTATAGGTACATGTTTCATCTTCTTCAACGTGATCAGAAGATTTATTGCCACTGGAGCTTCGATTCAGCAATT
TGCTCGGGATGTGACACAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTATATCACTCAACCGGGAGTAGCTGTAGGTCATCTGAGATCGAACAACAGAAGAT
TTTGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAAAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCA
GTTCACAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGTTTACCATAATGTAGAAGAAGTACCTCTAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCC
AATGATGATAATGCCAGCATTTGGAGTAGGATATTGTGATTCTGAGGTCAGTACAAGATATTATGACTCAGGGGTCGATCCATCATCTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGATCATCTACTATCTGGACGAACACACGTTAGTCAGTATAGGTACATGTTTCATCTTCTTCAACGTGATCAGAAGATTTATTGCCACTGGAGCTTCGATTCAGCAATT
TGCTCGGGATGTGACACAAGAATACATCCACTGGTATAATAATATTACGAGGCTCTATATCACTCAACCGGGAGTAGCTGTAGGTCATCTGAGATCGAACAACAGAAGAT
TTTGTGATGTTGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAAAGGTACATGGAGGAGATACATTATATGTACGATATACCTATTGTACCTCCACCA
GTTCACAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGTTTACCATAATGTAGAAGAAGTACCTCTAGTGACACAAACACAGAGCCAAACTGGTTATGGTAGTCC
AATGATGATAATGCCAGCATTTGGAGTAGGATATTGTGATTCTGAGGTCAGTACAAGATATTATGACTCAGGGGTCGATCCATCATCTTCATAG
Protein sequenceShow/hide protein sequence
MIIYYLDEHTLVSIGTCFIFFNVIRRFIATGASIQQFARDVTQEYIHWYNNITRLYITQPGVAVGHLRSNNRRFCDVADDPQQVLDICNNNERYMEEIHYMYDIPIVPPP
VHRGRVRVEEAELDVYHNVEEVPLVTQTQSQTGYGSPMMIMPAFGVGYCDSEVSTRYYDSGVDPSSS