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PI0006684 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0006684
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:5454863..5455240
RNA-Seq ExpressionPI0006684
SyntenyPI0006684
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046821.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.2e-5478.4Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEKS  G FAD WP+LDNNS+LP+LSVEIPLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G +TKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.1e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVE+PLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.1e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVEIPLS+GK++W+LQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

TYK04516.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.2e-5478.4Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEKS  G FAD WP+LDNNS+LP+LSVEIPLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G +TKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]2.7e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVE+PLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein1.3e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVE+PLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

A0A5A7TX42 Uncharacterized protein1.0e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVE+PLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

A0A5A7TZN9 Putative mitochondrial protein4.5e-5478.4Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEKS  G FAD WP+LDNNS+LP+LSVEIPLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G +TKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

A0A5A7UET3 Putative mitochondrial protein1.0e-5377.6Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEK   G FAD WP LDNNS+LP+LSVEIPLS+GK++W+LQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G VTKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

A0A5D3C267 Putative mitochondrial protein4.5e-5478.4Show/hide
Query:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW
        M+YFTERFL G RHL IL+D+NQPREDGLSL+VEKS  G FAD WP+LDNNS+LP+LSVEIPLS+GK++WVLQSSIH+EAPN+ R LTLG R+IEGQTRW
Subjt:  MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRW

Query:  GVVTKVSGEFCFTDCYWEWLEFVVG
        G +TKV GEFCFTDCYWEWLE VVG
Subjt:  GVVTKVSGEFCFTDCYWEWLEFVVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTACTTCACCGAACGCTTCTTATTTGGAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTCCTTTTGCAGATTTTTGGCCAAACCTGGACAACAACTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAACTCATGGGTCCTGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGCATAATTGAAGGCCAAACGCGTTGGGGTGTTGTGACTAAAGTCTCAGGAGAATTC
TGCTTTACCGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTACTTCACCGAACGCTTCTTATTTGGAAATAGGCACCTTACAATCCTTACTGATAAGAATCAACCAAGAGAAGATGGTCTCAGTCTCCTTGTAGAGAAGTCGTT
GACGGGTCCTTTTGCAGATTTTTGGCCAAACCTGGACAACAACTCGATTCTTCCCAAATTATCTGTGGAGATACCTTTGTCTCAGGGAAAAAACTCATGGGTCCTGCAAT
CTTCTATCCATGATGAGGCTCCTAATGCCAATCGAGTCCTCACTCTCGGACATCGCATAATTGAAGGCCAAACGCGTTGGGGTGTTGTGACTAAAGTCTCAGGAGAATTC
TGCTTTACCGACTGTTATTGGGAGTGGCTAGAGTTCGTAGTTGGTTAA
Protein sequenceShow/hide protein sequence
MIYFTERFLFGNRHLTILTDKNQPREDGLSLLVEKSLTGPFADFWPNLDNNSILPKLSVEIPLSQGKNSWVLQSSIHDEAPNANRVLTLGHRIIEGQTRWGVVTKVSGEF
CFTDCYWEWLEFVVG