CuGenDBv2

Gene ID	PI0006693
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Transcription termination factor MTERF5
Genome location	chr10:17164899..17166019
RNA-Seq Expression	PI0006693
Synteny	PI0006693
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034112.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa]

2.3e-123

66.4

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        MS++SS+F+LH IQ RFLN I TSTLP  SVST++FLKNSCGL SESP S  RKLQ +E+   KYEA IGFLKSHGF+NSQI KLVSK PSILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 E+L SD +VTAAICR + +L  DFKG +K N+DVL SEG+PS NIAKMIA +P  
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I+Q+VDRMI AVK VKELG+EPK  +FV AV + +S++DS W  KINVLKSLGWSEKEIF AFKKDP+YLG SE+KMRDVADFCFNTAKLDP TVISY  
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV
        FFK S+DK LRPRYKVLEVLKVKNLLK+KKIA VL+Q E+ FVE +VVKHLD+IPNLMDIYRGNVEAETKSV
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV

KAA0034119.1 transcription termination factor MTERF8 [Cucumis melo var. makuwa]

3.0e-123

65.78

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        MSKISS+F+LH  Q R LN +STSTLPLPSVST++FL NSCGL S SP+S GRKLQ +EK++ +Y A I FLKSHGFEN+QI  LVS+RPSILQS+VS N
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKP+    ++ G                                 E+L SDE+VTAAICR  ++L+CD KGN+KSNID+LASEGVPS NIA+MIA KPR 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I +KVD MI+AVK VKELG+EPK  +F  AV V +SM+DSTWK K+ V+KSLGWSEKEIFTAFKKDP+YLG SE+KMRDVADFCFNTAKLDP TVISY  
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKI--AWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV
        FFK S+DK LRPRYKVLEVLKVKNLLK+KKI  AW   Q ER FV+N VVKHLD+IPNLMDIYRGN  +ETKSV
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKI--AWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV

KAE8648666.1 hypothetical protein Csa_008752 [Cucumis sativus]

2.1e-124

66.85

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        M K SSTF+LH I KR LN +STSTLPLPSVST++FL NSCGL S SP+S GRKLQ +EK+  +YEA IGFLKSHGFENSQI KLVSK+PSILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 EML  DEKVT AICR S +L C+ KGN KS +DVL SEGVPS NIAKMIA KP  
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I+ KVDR IHAVK VKELG+EP+  +FV AV V +SM+DSTWK KINV+KSLGWSEKEIFTAFKK P YL  SEEK+RDVADFCFNTAKLDP +VI Y K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKS
        FFKCS+++ L+PRYKVLE LKVKNLLKSKKIAW+LV+ ER F+EN+V+K+LD+IPNLMDIYRGNV AETKS
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKS

XP_008446011.1 PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo]

8.8e-123

66.22

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        M K SSTF+LH IQKRFLN +STSTLPL SVSTVEFL NSCGL S SP+S GRKLQ +EK+  +YEA IGFLKSHG EN QI KLVS++P ILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 E+L SDE+VTAAI     +LI DFKG +KSNIDVLASEGVPS NIAK+I S  R 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I++KVDRMI  VK VKELG+EPK  +FV A+ +  S++DSTWK KINV+KSLGWSE EIFTAFKKDP +LG SEEKMRDVADFCFNTAKLDP +VI   K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL
         FKCS+DK L+PRYKVLEVLKVKNLLK+  IAWVLVQ+ER FV+ FVV+HLD+IPNLMDIYRGNV AETKSVL
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL

XP_031741758.1 transcription termination factor MTERF5, chloroplastic-like [Cucumis sativus]

2.6e-122

65.07

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        MSKISSTF+LH I KRFLN ISTS LP PSVST++FL NSC L SESP+S GRKLQ +EK   +YEA IGF KS+GFEN QI  LVS+RPSILQSRVSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 EML  DEKVTAAICR   ++  ++KG ++S +DVL SEGVPS NIA+MIA KP  
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I+ KVDRMI  VK VKELG EPK  +FV AV   +SM+DSTWK KINVLKSLGWSEKEI TAFKKDP+YL  SE+KMRDVADFCFNTAKLDP TVI Y K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNV--EAETKSVL
        FFK S+DK L+PRYKV+EVLKVKNLLK+KKIAW+L++ ER FVE ++VKHLD+IPNLMDIY+GNV  EAETKSV+
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNV--EAETKSVL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BEQ3 uncharacterized protein LOC103488865

4.3e-123

66.22

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        M K SSTF+LH IQKRFLN +STSTLPL SVSTVEFL NSCGL S SP+S GRKLQ +EK+  +YEA IGFLKSHG EN QI KLVS++P ILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 E+L SDE+VTAAI     +LI DFKG +KSNIDVLASEGVPS NIAK+I S  R 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I++KVDRMI  VK VKELG+EPK  +FV A+ +  S++DSTWK KINV+KSLGWSE EIFTAFKKDP +LG SEEKMRDVADFCFNTAKLDP +VI   K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL
         FKCS+DK L+PRYKVLEVLKVKNLLK+  IAWVLVQ+ER FV+ FVV+HLD+IPNLMDIYRGNV AETKSVL
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL

A0A5A7SSP1 Transcription termination factor MTERF5

1.1e-123

66.4

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        MS++SS+F+LH IQ RFLN I TSTLP  SVST++FLKNSCGL SESP S  RKLQ +E+   KYEA IGFLKSHGF+NSQI KLVSK PSILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 E+L SD +VTAAICR + +L  DFKG +K N+DVL SEG+PS NIAKMIA +P  
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I+Q+VDRMI AVK VKELG+EPK  +FV AV + +S++DS W  KINVLKSLGWSEKEIF AFKKDP+YLG SE+KMRDVADFCFNTAKLDP TVISY  
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV
        FFK S+DK LRPRYKVLEVLKVKNLLK+KKIA VL+Q E+ FVE +VVKHLD+IPNLMDIYRGNVEAETKSV
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV

A0A5A7SU45 Transcription termination factor MTERF5

2.8e-122

66.4

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        M K SSTF+LH IQKRFLN +STSTLPL SVST++FL NSCGL S SP S GRKLQ +EK+  +YEA IGF KSHGFENSQI KLVS++PSILQS VST+
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 EML SDEKV AAICR S IL  + KG ++SNIDVL SEGVPSTNIAKMIA  PR 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I++ VDR+IHAVK VKELG+EPK   FV AVS V SM+DS+WK KINV+KSLGWSEKEIFTAFKKDP +L  SEEKMRDVADFCFNTAKLDP +VI Y K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV
        FF+CS+DK L+PRYKV EVLKVKNLLK+K IA   ++ ER FVEN VVKHLD+IPNLMDIYRGN  +ETKSV
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV

A0A5A7SYC3 Transcription termination factor MTERF8

1.5e-123

65.78

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        MSKISS+F+LH  Q R LN +STSTLPLPSVST++FL NSCGL S SP+S GRKLQ +EK++ +Y A I FLKSHGFEN+QI  LVS+RPSILQS+VS N
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKP+    ++ G                                 E+L SDE+VTAAICR  ++L+CD KGN+KSNID+LASEGVPS NIA+MIA KPR 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I +KVD MI+AVK VKELG+EPK  +F  AV V +SM+DSTWK K+ V+KSLGWSEKEIFTAFKKDP+YLG SE+KMRDVADFCFNTAKLDP TVISY  
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKI--AWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV
        FFK S+DK LRPRYKVLEVLKVKNLLK+KKI  AW   Q ER FV+N VVKHLD+IPNLMDIYRGN  +ETKSV
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKI--AWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSV

A0A5D3CWA2 Transcription termination factor MTERF5

4.3e-123

66.22

Show/hide

Query:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN
        M K SSTF+LH IQKRFLN +STSTLPL SVSTVEFL NSCGL S SP+S GRKLQ +EK+  +YEA IGFLKSHG EN QI KLVS++P ILQS+VSTN
Subjt:  MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTN

Query:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI
        LKPK    ++ G                                 E+L SDE+VTAAI     +LI DFKG +KSNIDVLASEGVPS NIAK+I S  R 
Subjt:  LKPKLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRI

Query:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK
        I++KVDRMI  VK VKELG+EPK  +FV A+ +  S++DSTWK KINV+KSLGWSE EIFTAFKKDP +LG SEEKMRDVADFCFNTAKLDP +VI   K
Subjt:  IIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL
         FKCS+DK L+PRYKVLEVLKVKNLLK+  IAWVLVQ+ER FV+ FVV+HLD+IPNLMDIYRGNV AETKSVL
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRGNVEAETKSVL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

3.5e-21

23.65

Show/hide

Query:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKL-----------------SSSRK-----
        TV +L +SCGL  ES  S  R +++    S K ++ +   K HGF N QIT ++   P +L       + PKL                 SSS K     
Subjt:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKL-----------------SSSRK-----

Query:  ----------SGSEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVS
                  S   +L  +E V   + R            +   + +    GVP  +I  ++ + P     +  R    +  V   G +PK + FV A+ 
Subjt:  ----------SGSEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVS

Query:  VVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTKFFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIA
             ++S  + K  + +  GWS+++   A  + P+ +  S+EK+    ++  N   L    +++       S++K ++PR +V+ +L  K L+K + I 
Subjt:  VVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTKFFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIA

Query:  W--VLVQTERNFVENFVVKHLDKIPNLMDIYRGN
        +  +L      F++ FV+K+ D++P L+  +  N
Subjt:  W--VLVQTERNFVENFVVKHLDKIPNLMDIYRGN

AT1G61970.1 Mitochondrial transcription termination factor family protein

6.0e-21

25.82

Show/hide

Query:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKLSSSRKSGS-------------EMLGSD
        TV +L +S GL ++   S  RK+   +K++   ++ +  L SHGF  SQI+ ++   P +L +    +L PKL   +  G+             E+LG  
Subjt:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKLSSSRKSGS-------------EMLGSD

Query:  EKVTAAICR---CSTIL--------ICDF--KGNIKS---NIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVV
           T ++       T+L        +C    +GN+++   N+ VL   G+P   +  ++ S  + +  K ++    +K V E+G +P  S FV A+ V+ 
Subjt:  EKVTAAICR---CSTIL--------ICDF--KGNIKS---NIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVV

Query:  SMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRD-----------------------------------VADFCFNTAKLDPVTVISYTK
         MN+ T + K+++ KSLG+   +++++FKK P  L  SE+KM D                                     +F           V+S   
Subjt:  SMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRD-----------------------------------VADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSK--KIAWVLVQTERNFVENFVVKHLDK--IPNLMDIYRGN
         F  S++K + PR  V++ L  K L++++   I+ VL+ T++ F+  +V  H+DK  +  LM IYR +
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSK--KIAWVLVQTERNFVENFVVKHLDK--IPNLMDIYRGN

AT1G61970.2 Mitochondrial transcription termination factor family protein

6.0e-21

25.82

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Query:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKLSSSRKSGS-------------EMLGSD
        TV +L +S GL ++   S  RK+   +K++   ++ +  L SHGF  SQI+ ++   P +L +    +L PKL   +  G+             E+LG  
Subjt:  TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKLSSSRKSGS-------------EMLGSD

Query:  EKVTAAICR---CSTIL--------ICDF--KGNIKS---NIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVV
           T ++       T+L        +C    +GN+++   N+ VL   G+P   +  ++ S  + +  K ++    +K V E+G +P  S FV A+ V+ 
Subjt:  EKVTAAICR---CSTIL--------ICDF--KGNIKS---NIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVV

Query:  SMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRD-----------------------------------VADFCFNTAKLDPVTVISYTK
         MN+ T + K+++ KSLG+   +++++FKK P  L  SE+KM D                                     +F           V+S   
Subjt:  SMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRD-----------------------------------VADFCFNTAKLDPVTVISYTK

Query:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSK--KIAWVLVQTERNFVENFVVKHLDK--IPNLMDIYRGN
         F  S++K + PR  V++ L  K L++++   I+ VL+ T++ F+  +V  H+DK  +  LM IYR +
Subjt:  FFKCSIDKLLRPRYKVLEVLKVKNLLKSK--KIAWVLVQTERNFVENFVVKHLDK--IPNLMDIYRGN

AT3G46950.1 Mitochondrial transcription termination factor family protein

3.0e-20

26.14

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Query:  KRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPK---LSSSRKS
        K F + I+  + P  S  TV +L  S GL  +   +  +K+   +K +   ++ +  L+S+GF++SQI++++   P +L +    +L+PK   L S   S
Subjt:  KRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPK---LSSSRKS

Query:  GSEMLGSDEKVTAAICRC---STILICDF-------------------KGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLE
         SE++     V   + +    S  L  DF                   KGN   NI VL   GVP   +  ++ S+ + +  K ++   ++K V ++G +
Subjt:  GSEMLGSDEKVTAAICRC---STILICDF-------------------KGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLE

Query:  PKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEK---MRDVADFC-------FNTAKLDPVTVIS--------------
        P  S FV A+ VV  M++ T + K+NV K LG+SE EI+  FKK P +L  SE+K   M +    C        +  K  P  + S              
Subjt:  PKGSLFVRAVSVVVSMNDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEK---MRDVADFC-------FNTAKLDPVTVIS--------------

Query:  ----------YTKFFKC------------------------------------SIDKLLRPRYKVLEVLKVKNLLKSKK--IAWVLVQTERNFVENFVVK
                    K + C                                    S++K + PR  V++ L  K L+ S+   I+ VLV T++ F++ +V+K
Subjt:  ----------YTKFFKC------------------------------------SIDKLLRPRYKVLEVLKVKNLLKSKK--IAWVLVQTERNFVENFVVK

Query:  HLDKIPNLMDIY-RGNV
        H   +P LM I+ RG V
Subjt:  HLDKIPNLMDIY-RGNV

AT5G07900.1 Mitochondrial transcription termination factor family protein

4.5e-32

28.18

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Query:  SIQKRFLNVISTSTLPLPSVS--------TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKP
        S+Q +F + ++T T   P           T+ +L +SCGL  +S +   RKL ++  +  +    +  L+ HGF  +QI+ LV KRP +L +   + L P
Subjt:  SIQKRFLNVISTSTLPLPSVS--------TVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKP

Query:  KLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQ
        KLS     G                                  +L SDEK+ AA+ R + + + D   N+  NI+ +A  GVP   I  ++   P  ++Q
Subjt:  KLSSSRKSG--------------------------------SEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQ

Query:  KVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSM-NDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTKFF
        K        K  +E+G  P+ S FV A+  +    N S W     V +  GWSE +I  AFKK P  +  SE K+    ++  N   + P ++       
Subjt:  KVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSM-NDSTWKMKINVLKSLGWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTKFF

Query:  KCSIDKLLRPRYKVLEVLKVKNLLKSK-KIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRG
          S++K + PR  V +VL    L+K    +  +LV  E+ F+E  V+K+ +++P LM++Y G
Subjt:  KCSIDKLLRPRYKVLEVLKVKNLLKSK-KIAWVLVQTERNFVENFVVKHLDKIPNLMDIYRG

Sequences

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CDS sequence

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ATGTCCAAAATTTCCTCCACATTTGTTCTTCATTCCATCCAAAAACGTTTTCTGAATGTCATTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCGTCGAATTCCT
CAAAAATTCATGTGGTCTTGATTCAGAATCTCCTTCTTCCACCGGTCGAAAGCTCCAAATCAATGAAAAAGACTCTCACAAGTACGAAGCTTTTATCGGTTTCTTGAAAT
CACATGGATTCGAGAATTCACAGATCACCAAGTTGGTCTCGAAGCGACCTTCGATCCTTCAATCCAGAGTATCCACCAATCTGAAGCCTAAATTGAGTTCCTCCAGGAAA
TCGGGTTCGGAAATGCTTGGATCGGATGAAAAAGTAACTGCTGCTATTTGTCGTTGTTCAACGATTCTAATTTGTGATTTTAAGGGTAATATAAAATCTAACATTGATGT
TTTGGCCAGTGAAGGAGTACCTTCTACGAATATAGCTAAAATGATTGCATCGAAACCTAGAATTATTATCCAAAAGGTTGATAGAATGATTCATGCAGTGAAAATGGTGA
AAGAATTAGGCCTTGAACCAAAGGGTAGTCTGTTTGTTCGTGCAGTTAGTGTAGTGGTTTCAATGAATGATTCAACTTGGAAGATGAAAATAAATGTTTTGAAGAGTTTA
GGATGGTCTGAGAAGGAAATTTTTACAGCATTTAAGAAAGATCCAGATTATTTAGGTCGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAA
GTTGGATCCAGTAACTGTAATTTCTTACACGAAATTCTTCAAGTGTTCAATCGACAAGCTGCTCCGACCGAGATACAAAGTTCTTGAGGTTTTAAAGGTGAAAAATCTTC
TTAAGTCCAAAAAGATTGCTTGGGTGCTCGTACAAACGGAGAGAAATTTTGTGGAGAATTTTGTTGTTAAGCATTTGGATAAAATCCCAAATCTTATGGACATATACCGG
GGCAATGTCGAAGCCGAAACAAAATCTGTTCTATAG

mRNA sequence

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Protein sequence

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MSKISSTFVLHSIQKRFLNVISTSTLPLPSVSTVEFLKNSCGLDSESPSSTGRKLQINEKDSHKYEAFIGFLKSHGFENSQITKLVSKRPSILQSRVSTNLKPKLSSSRK
SGSEMLGSDEKVTAAICRCSTILICDFKGNIKSNIDVLASEGVPSTNIAKMIASKPRIIIQKVDRMIHAVKMVKELGLEPKGSLFVRAVSVVVSMNDSTWKMKINVLKSL
GWSEKEIFTAFKKDPDYLGRSEEKMRDVADFCFNTAKLDPVTVISYTKFFKCSIDKLLRPRYKVLEVLKVKNLLKSKKIAWVLVQTERNFVENFVVKHLDKIPNLMDIYR
GNVEAETKSVL

PI0006693 (gene) of Melon (PI 482460) v1 genome